Streptomyces malaysiensis DSM 4137: SMALA_5704
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Entry
SMALA_5704 CDS
T05189
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
smal
Streptomyces malaysiensis DSM 4137
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smal03016
]
SMALA_5704
Enzymes [BR:
smal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
SMALA_5704
Transfer RNA biogenesis [BR:
smal03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
SMALA_5704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ATL85934
LinkDB
All DBs
Position
7014278..7015780
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AA seq
500 aa
AA seq
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MDVQAPKSYEIRTYGCQMNVHDSERLSGLLEEAGYVRAPEGTDEGEADIVVFNTCAVREN
ADNRLYGNLGRLAPIKARRPGMQIAVGGCLAQKDRDTIVNKAPWVDVVFGTHNIGSLPVL
LERARVQEEAQVEIAESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFCIVPALRGKEK
DRRPGDILAEVEALVAEGVTEITLLGQNVNAYGSDIGDREAFSKLLRACGKVEGLERVRF
TSPHPRDFTDDVISAMAETENVMPQLHMPLQSGSDTVLKAMRRSYRQERYLGIIEKVRAA
MPDAAISTDIIVGFPGETEENFEQTLHVVREARFTQAFTFQYSKRPGTPAAEMDGQVPKK
VVQERYERLVALQEEISWEENKKQVGRTLEVLVAEGEGRKDDATRRLSGRAPDNRLVHFA
RPEEPVRPGDVVTVDITYAAPHHLLAEGPARSVRRTRAGDAWERRNAPGEKKPAGVLLGL
PTVGAPPPLPATPAAGCGCD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
gtggacgttcaagcacccaagagctacgagatccgcacctacgggtgccagatgaatgtc
catgactccgagcggctctcgggccttctggaagaggcgggctacgtccgcgcgcccgag
ggcaccgatgagggcgaggccgacatcgtcgtcttcaacacctgcgcggtgcgggagaac
gccgacaaccggctgtacggcaacctcggccggctcgcgccgatcaaggcgcggcggccg
ggtatgcagatcgccgtcggtggctgtctggcccagaaggaccgcgacaccatcgtcaac
aaggccccgtgggtcgatgtggtcttcggcacccacaacatcggcagcctgccggtgctg
ctggagcgcgcccgcgtccaggaggaagcccaggtcgagatcgccgagtccctggaagcc
ttcccctccacccttccgacgcggcgcgagtccgcgtacgccgcgtgggtctccatctcc
gtgggctgcaacaacacatgcaccttctgcatcgtcccggcgctgcgcggcaaggagaag
gaccgccggcccggcgacatcctcgccgaggtggaggccctggtcgccgagggtgtcacc
gagatcaccctgctcggccagaacgtgaacgcctacggctccgacatcggcgaccgcgag
gcgttcagcaagctgctgcgcgcctgcgggaaggtcgagggcctggagcgggtccggttc
acctcaccgcatccgcgcgacttcaccgacgacgtcatctccgccatggccgagacggag
aacgtgatgccgcagctgcacatgccgcttcagtccggctcggacaccgtgctcaaggcg
atgcgccgctcgtaccggcaggagcgctacctgggcatcatcgagaaggtgcgcgccgcg
atgccggacgccgccatctcgaccgacatcatcgtcggcttccccggggagacggaggag
aacttcgagcagacgctgcacgtggtgcgcgaggcgcgcttcacgcaggcgttcaccttc
cagtactccaagcggcccgggacacccgccgccgagatggacggccaggtgcccaagaag
gtcgtccaggagcgctacgagcggctggtcgccctccaggaggagatctcctgggaggag
aacaagaagcaggtcggccggacgctggaggtgctggtcgccgagggagagggccgtaag
gacgacgccacgcggcggctgtccggccgggcccccgacaaccgcctggtgcacttcgca
cggcccgaggagccggtgcgccccggtgatgtcgtcaccgtcgacatcacctacgccgcc
ccgcaccatctgctggccgagggcccggcccggagcgtgcggcgcacccgtgccggagac
gcctgggagcggcggaacgcgccaggggagaagaagcccgcgggtgtgctgctgggcctg
ccgacggtgggtgccccgccgccgctgccggccacgcccgccgcgggctgcggctgcgac
tga
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