Streptomyces malaysiensis: SMALA_5744
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Entry
SMALA_5744 CDS
T05189
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
smal
Streptomyces malaysiensis
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smal03032
]
SMALA_5744
03400 DNA repair and recombination proteins [BR:
smal03400
]
SMALA_5744
Enzymes [BR:
smal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SMALA_5744
DNA replication proteins [BR:
smal03032
]
Prokaryotic type
DNA Topoisomerases
SMALA_5744
DNA repair and recombination proteins [BR:
smal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SMALA_5744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
Motif
Other DBs
NCBI-ProteinID:
ATL85974
UniProt:
A0A291SYM1
LinkDB
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Position
complement(7068162..7070615)
Genome browser
AA seq
817 aa
AA seq
DB search
MARRRTKTPPPDDFEERILDIDVVDEMQGSYLEYAYSVIYSRALPDARDGLKPVHRRILY
QMNEMGLRPERGFVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRLPMVDGHGNFG
SLGNDDPPAAMRYTECRMASATSLMTESIDEETVDFSPNYDGSEQEPVTLPAAYPNLLVN
GTSGIAVGMATNMPPHNLGEVIAAARHLIRHPAADLDTLMRFVPGPDLPTGGRVVGLSGV
RDAYETGRGTFKIRATVAVEDVTARRKGLVVTELPFAVGPEKVISKIKDLVGAKKLQGIA
DVKDLTDREHGLRLVIEVKNGFNPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLKE
LLEVYLDHRFNVVRRRSEFRRTKRRNRLHLVEGLLVALLDIDEVIRLIRQSENAAEAKRS
LIERFGLSDIQTQYILDTPLRRLTKFDRLELESERDRLKAEIEELTRILDSDAELRKLVS
GELAAVAKKFGTPRRTVLLESSNAPVTAVPLEVADDPCRVLLSSTGLLARTADGEPLPVE
GKAKRAKHDVIVSAVPATARGSVGAVTSTGRLLRLSVIDLPMLPESAAPPNLAGGAPIAE
FLSLEDGEELICLTTLDESSPGLAIGTEQGVVKRVVPDYPANKDELEVIGLKEGDRVVGA
VELSTGEEDLVFITDDAQLLRYTASQVRPQGRAAGGMAGIKLGSGAKVISFTAVDPAADA
VVFTVAGASGTLDDSVQQSAKLTPFDQYPRKGRATGGVRCQRFLKGEDYLVMAWAGATPA
RAAGANGAPAALPEIDPRRDGSGEPLAKPVTVVAGPV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgccgcaccaagaccccgccgccggacgacttcgaggagcgcatcctcgac
atcgacgtcgtcgacgagatgcagggctcctacctcgagtacgcctactcggtcatctac
tcgcgcgcgctgcccgacgcccgagacgggctgaagcccgtgcaccgccgcatcctctac
cagatgaacgagatggggctgcgccccgagcgcggcttcgtgaagtgcgcccgcgtcgtc
ggcgaggtgatgggaaagctccacccgcacggcgacgcgtcgatctacgacgcgctggtg
cgcatggcgcagcccttctccatgcgcctgccgatggtcgacggccatggcaacttcggc
tcgctgggcaatgacgacccgccggccgcgatgcggtacaccgagtgccggatggcgtcg
gccacctcgctgatgacggagtcgatcgacgaggaaacggtcgacttctcaccgaactac
gacggcagtgagcaggagcccgtcaccctccccgccgcctatccgaacctgctggtcaac
ggcacgtccggaatcgcggtcggcatggcgaccaatatgccgccgcacaacctgggcgag
gtcatcgccgccgcccgccatctgatcaggcatccggccgccgacctcgacacgctgatg
cggttcgtaccggggcccgatctgccgaccggcggccgggtcgtgggcctgagcggcgtc
cgggacgcttacgagacggggcgtggcaccttcaagatccgcgccacggtggccgtggag
gacgtgacggcccgccgtaagggcctggtcgtcaccgagctgcccttcgccgtggggccc
gagaaggtcatctccaagatcaaggacctggtcggcgccaagaagctccagggcatcgcg
gacgtcaaggacctcaccgaccgtgagcacgggctgcggctggtgatcgaggtcaagaac
ggtttcaaccccgaggccgtcctggagcagctctacaagctcacgccgatggaggagtcc
ttcggcatcaacaacgtggcgctggtggacggccagccgctcacgctggggctgaaggag
ctgctggaggtctatctcgaccaccgcttcaacgtggtccggcggcgcagcgagttccgg
cgcaccaagcggcgcaaccggctgcacctggtcgagggtctgctggtggcgctcctcgac
atcgacgaggtcatccgcctcatccggcagagcgagaacgcggcggaggccaagcggtcg
ctgatcgagcgcttcggcctctccgacatccagacgcagtacatcctggacaccccgctg
cgccggctcaccaagttcgaccggctggagctggagtcggagcgcgaccggctcaaagcc
gagatcgaggagctcacccggatcctcgactccgacgccgagctgcgcaagctggtctcc
ggcgaactggccgcggtggccaagaagttcggcaccccgcgccgcacggtgctgctggag
tcgtccaacgcgccggtgaccgcggtgccgctggaggtcgcggacgacccctgccgggtg
ctgctgtcctccaccgggctgctggcacgcaccgccgacggcgagccgctcccggtcgag
gggaaggccaagcgcgccaagcacgatgtgatcgtctcggcggtcccggcgacggcccgt
ggctccgtgggggcggtgacctcgaccgggcggctgctgcggctgtcggtgatcgacctc
ccgatgctcccggagtcggccgcgccccccaatctggcgggcggggcgcccatcgccgag
ttcctctcgctggaggacggcgaggagctgatctgcctcaccaccctggacgagtcctca
ccggggctcgccatcggcacggagcagggcgtcgtcaagcgcgtggtccccgactacccg
gccaacaaggatgagttggaagtgatcggcctcaaggagggcgaccgggtcgtgggcgcg
gtggagctgagcaccggcgaggaggacctggtcttcatcaccgacgacgcccagctgctg
cggtacacggcgagccaggtgcggccgcagggccgcgccgcgggcggtatggccggtatc
aagctcggctccggcgccaaggtgatctcgttcacagccgtggacccggcggccgacgcg
gtggtcttcacggtcgcgggcgcgagcggcacgctcgatgactcggtacagcagtcggcc
aagctcacccccttcgaccagtacccgcgcaagggccgggccacgggcggggtgcgctgc
cagcggttcctgaagggcgaggactacctggtcatggcctgggcgggcgcgaccccggcc
cgcgcggcgggggccaatggagccccggcggcgctgccggagatcgacccgcgccgggac
ggctcgggcgagccgctcgccaagccggtgacggtggtggccgggccggtgtag
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