Streptomyces malaysiensis: SMALA_6168
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Entry
SMALA_6168 CDS
T05189
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
smal
Streptomyces malaysiensis
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smal03400
]
SMALA_6168
Enzymes [BR:
smal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SMALA_6168
DNA repair and recombination proteins [BR:
smal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SMALA_6168
Prokaryotic type
SMALA_6168
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ATL86396
LinkDB
All DBs
Position
complement(7592332..7593696)
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AA seq
454 aa
AA seq
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MSTSLSVFTSDLRLSDNPVLRGATGSAERVVPLFVVDRGLAGTGFAVPNRVAFLADALAD
LDAGLRGRGGRLVVREGEAVAEILRAARQTDADEVHIAGGVSGYATRRERRLRDALEADG
RRLRVHGAVVTAVEPGEVTPAGKDHFAVFTPYFRAWQRAGLRQPLTAPRTVDVPSGARSE
PVAAVTSLAPGSPSPGLPEGGETAGRRRMRSWWRSGLRSYADRQDDLAGDATSRLSPYLH
FGCLSPAELVHRAREAGGPGADAFVRQLAWRDFHHQVLAARPDAAHADYRPRGDRWREDT
AEVAAWKAGRTGYSLVDAGMRQLRHEGWMHNRARLLVASFLTKTLYQDWRIGARHFLDLL
VDGDVANNQLNWQWAAGTGTDTRPNRVLNPLAQARRFDPDGAYVRRWVPELAEVAGSGVH
TPWRLPKAERDRLDYPDPIVDLQEGLARFRHARG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgtccctctccgtcttcacctccgatctgcggctgtccgacaaccccgtgctg
cgcggcgcgacgggctccgcggagcgggtcgttccgctattcgtcgtggaccgcggcctg
gccgggaccgggttcgccgtccccaaccgggtggcgttcctggcggacgcgctggccgac
ctcgacgcgggcctgcgcggacgcggtgggcggctggtggtccgcgagggcgaggcggtg
gccgagatcctgcgggcggcgcggcagacggacgcggacgaggtgcatatcgcgggcggg
gtgagcggctacgccacccgccgcgagcggcggctgcgcgatgcgctggaggcggacgga
cggcggctgcgggtgcatggcgcggtggtgacggcggtcgaaccgggcgaggtgaccccg
gcgggcaaggaccacttcgcggtcttcaccccgtacttccgcgcctggcagcgggccggg
ctccggcagccgctcaccgcgccgcgcacggtcgatgtgccgtccggggcgcgctcggag
ccggtggcggcggtcacctcgctcgccccgggcagcccctcccccgggctgcccgagggc
ggggagacggcgggccgccgccgtatgcgctcctggtggcggtcgggcttgaggagttac
gccgaccggcaggacgacctggcgggcgacgccacctcccggctctccccgtatctgcac
ttcggctgtctgtccccggcggagctggtgcaccgggcacgggaggcgggcggcccgggc
gccgacgctttcgtacggcagctggcctggcgggacttccaccatcaggtgctggccgcc
cggccggacgccgcgcacgccgactaccgcccgcggggcgaccggtggcgggaggacacc
gcggaggtcgcggcctggaaggcggggcgcaccggctattcgctggtcgacgcggggatg
cggcagctgcgccacgagggctggatgcacaaccgggcgcggctgctggtggcgagcttc
ctcaccaagacgctctaccaggactggcggatcggcgcccggcacttcctggacctgctg
gtggacggggatgtggccaacaaccagctgaactggcagtgggcggcgggcaccggcacc
gacacccggccgaaccgggtcctcaacccgctggcgcaggcccggcggttcgatccggac
ggcgcgtatgtgcggcgctgggtgccggagctggccgaggtggcgggctccggcgtccat
acgccctggcggctgccgaaggccgagcgggaccggctggactaccccgacccgatcgtg
gacctccaggaagggctggcccgcttccggcacgcccggggctga
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