Stieleria maiorica: Mal15_00210
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Entry
Mal15_00210 CDS
T09818
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
smam
Stieleria maiorica
Pathway
smam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mal15_00210 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smam03019
]
Mal15_00210 (deaD)
03009 Ribosome biogenesis [BR:
smam03009
]
Mal15_00210 (deaD)
Enzymes [BR:
smam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mal15_00210 (deaD)
Messenger RNA biogenesis [BR:
smam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mal15_00210 (deaD)
Ribosome biogenesis [BR:
smam03009
]
Prokaryotic type
rRNA helicases
Mal15_00210 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
CMS1
Flavi_DEAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QEF95995
UniProt:
A0A5B9M8T0
LinkDB
All DBs
Position
22405..24498
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AA seq
697 aa
AA seq
DB search
MGSENELNLSIEDHQVTVENEPELSESAPVSEPAPVSEPAPVSEPAPVSESAPVSESAPS
AVSDDAEVEAGLSDDVAEPEAEAPTGFAALELRRQVFDAVVESGYSEPTSVQQQVIPHML
AGRDVLAQSQTGSGKTAAFALPILSTIDSKQRSVQTLVLAPTRELAIQVAESFEKYAENL
KGFSVLAIYGGQDYEHQFRALRRGVDVVVGTPGRVIDHIKRGTLDLSELRCLVLDEADEM
LNMGFLEDVEFVLEQTPEKRQVTLFSATMPGPIRSIADRYLVDPALVTIEKKHVTAESIR
QRAVIVPPKEKASALTRFLEAEATDGVIVFTKTKDTTVRLAEQLIRNGFAATALNGDMPQ
TVRERTIDQLKSGRLDVLVATDVAARGLDVTRISHVFNFDLPHDAESYIHRIGRTGRAGR
SGEAIIFLTPAQRRKLKLIERATKKSIELVEVPSADAINAMRIERFKASITQTIADKDLT
LFKDLIGQYAQETGKPMEMIAAALAEIGQHGRTFLVKDRPRRARDEDRDRGEGRRGREDR
GGGAEFGKRPRLLGPPEPGMVRYRIEVGRNDGVAPRNIVGAVANEAGIQSQMIGPIKIYP
HFSTVDLPEGMPKDVYQTLQRAWVSGKQLRIRPDRGPGQRDSGAHPGGRPGGFRKGGKPG
GKFRGKADGAFGGPSGALGGKAAAGKKKKKKKKQRKN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgggatccgagaacgaattgaatttgtcgatagaagaccatcaggtaacggtcgagaat
gaacctgaattgagtgagtcggcccccgttagtgaaccggcccccgttagtgaaccggcc
cccgttagtgaaccggcccccgttagtgaatcggcccccgttagtgaatcggccccgagt
gcagtttccgacgacgccgaggttgaggcgggcttgagcgacgacgtggccgaacccgag
gcagaagcaccgaccgggtttgcggcgttggaattgcgccgacaggtgtttgatgcggtc
gtcgagtcgggctattccgagccgacttcggtgcaacagcaagtgattccgcacatgttg
gctggccgcgacgtgctggcccagtcgcagaccggatcgggaaagaccgcggcctttgcg
ttgccgattctgtcgacgatcgattccaagcagcgctcggtccagacgttggtgctggca
ccgacgcgggaattggcaattcaagtcgccgaatcgttcgagaagtatgctgagaacttg
aaaggtttcagcgttctggcgatttatggcggccaggactacgagcatcagtttcgagcg
ctgcgccgcggcgtcgacgtcgtcgtcgggacgcccggacgcgtgatcgatcacatcaag
cgcgggacgcttgatctgagcgagctgaggtgtctggtcttggacgaggccgacgagatg
ttgaacatggggttcctggaggacgtcgagttcgtgctcgaacagacaccggagaaacgc
caggtcacactgttctcggccacgatgcccggcccgatccgctcgatcgccgaccggtat
ttggtcgatcccgctctggtgacgatcgaaaaaaagcacgtcacggccgaatcgattcgg
caacgcgcggtgatcgttccccccaaggaaaaagccagcgcgctgacgcgattcttggaa
gccgaagcgaccgacggggtgatcgtcttcaccaaaaccaaggacaccaccgtccgcttg
gccgaacagctgatccgcaacgggtttgccgccaccgcactcaacggcgatatgcctcaa
acggtacgtgaacgaaccatcgaccaactcaaatccggacgtttggatgtgttggtcgcg
accgacgtggccgccaggggattggatgtcacccggatcagccacgttttcaattttgat
ctgccgcacgacgccgaatcgtacatccaccggatcggacgaaccggccgtgccggacgt
agcggtgaagcgatcatctttttgacacccgcccaacggcgaaaattaaaactgatcgag
cgggccaccaagaaatcgatcgagctggttgaggttccctcggccgatgcgatcaacgcg
atgcggatcgaacgtttcaaagcgtcgatcacacagaccatcgccgacaaggatttgacg
ctgttcaaggatttgatcggacagtatgcccaggaaaccggcaaaccgatggagatgatc
gccgcagcgctggcggagatcgggcaacacggacgcacatttttggtcaaagatcgtccc
agacgcgcccgagacgaggaccgagaccgtggtgaggggcgtcgtggccgcgaggatcgc
ggcggcggggcggaattcggcaagcggccgcggttgctcgggccgcccgaaccgggcatg
gtccgctatcgaatcgaagtcggacgcaacgacggcgtcgcaccccgcaacatcgtcggt
gcggtcgccaatgaagccggcatccaaagccagatgatcgggccgatcaagatctatccg
cacttcagcacggtggatttgcccgaggggatgcccaaagacgtttaccagacactacaa
cgcgcctgggtctcggggaaacagctgcggattcgtcccgatcgcggaccgggtcagcga
gattcgggtgctcatccaggtggccgtccgggcggatttcgaaaaggcggcaaacccggc
gggaagttccgcggcaaggcggacggggcgtttggcggcccgtccggggccctgggcggc
aaagcggcggcgggaaagaagaagaaaaagaagaagaagcagcgcaagaattag
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