Stieleria maiorica: Mal15_01200
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Entry
Mal15_01200 CDS
T09818
Symbol
rapA_1
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
smam
Stieleria maiorica
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QEF96094
UniProt:
A0A5B9M955
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Position
152421..155795
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AA seq
1124 aa
AA seq
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MSRSQSQVEKLRKVLASRRNSGDLGQLMSLFGDDGDWFDEPEFDALDPKSWIDWLRELKG
QFPGSVQTAHVRSKRERSTRADIRIDRVYDCGEMQGTWSKDGKVHNVYLSVDEESSPAGC
NCEESEGMDPCLHCYQFIIHAIEQLDQDRSLRAKIERDQMLSEEPPRESFLPDPSAIAIA
QLNQIVADQNDLFSDVVDRDDDLLPPLAESVPQRVLWDFSESRGGYLSIQPLLQQKKKRG
DGYTKGKKIRLDHLLNDRSIPLSEADQRVVGLIERNTSYYSQYGYELDPVAALEQLVGQD
NVAWDREPIRVQTYPNYLAIGSADDSFRILFCDEMGGTFLTQVIVSREAFLRFDLQNNRI
LIGHATEAESDLIRSLVQLPPVSRNRLEELVQPLVKFQKRLSVLLPPSTAGTIRLAEGRP
AILLRSRADGRLDFGIRIRDAAGVLRRPLSDPMVVATEIDGQKVQLVRTVTHESEQIDRL
LARWGLSIDPEDGFGTIEDFGVALRLIEDLQSPESDVEVLWDRTGEKPVTVLGNLSSSNV
KVDITNKRNWFGITGECTFGEHSMPLGDLINGLPDDDQTGIGDYIKLADGQWARISAGLR
QRLKRLQAATHTDRKTLKLDATAAPAIRELVDADVAVKASRAWEKCVKRLAKAEKLDPAV
PKGLDADLRDYQVDGFKWLRKLAEWGVGGILADDMGLGKTLQTLAVLLDRSADGPALVIA
PTSVGFNWQREAERFAPGLDVHLYRETERGEFLPSVGPGSLVICSYGLALRDAEALAGVN
WSTMVLDEAQAIKNSRSKTSKAIAGIDADWTVALTGTPVENHLGELWSLFHVVSPGVFGG
WEHFRKRFAAPIEKEGSQPARRALAERLKPFVLRRTKSEVLTELPPRTEMNLYVDLSPAE
RAEYEKVRLAAIGEIDSIEALPHIQDQRFKILALMTRLRQIACHAGLVNEQWTDSSAKLD
QLCETLDSLREEGHRALVFSQFTEHLGLIRRALEERGFSYQYLDGSTPAKARQVAVDEFQ
SGSADVFLISLKAGGTGLNLTAADYVIHMDPWWNPAVEDQATDRAHRMGQDKPVMVYRIV
ARGTIEEEILALHESKRDLVAGVMEGTEAAAKLSNDDLIRMLRG
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcgatctcaaagccaagtggaaaaacttcggaaagtcctcgcgtcgcgacgcaat
tccggggatctaggtcagttgatgtcgctcttcggcgacgacggcgattggttcgacgaa
ccggaatttgatgctctggatcccaagtcgtggatcgactggctgcgagagctcaagggg
cagtttcccggttcggtgcaaaccgcgcatgttcgctcgaaaagggagcggtccacgcgg
gcggatattcgaatcgatcgggtgtatgactgcggagaaatgcaggggacgtggagcaag
gatgggaaggtccacaacgtctacttgtccgttgacgaggaatcttcgccggccggatgc
aactgcgaggaatccgaggggatggacccctgtttgcattgctatcaattcattattcac
gcgatcgagcaactggatcaggatcggagcttgcgggccaagatcgagcgtgaccagatg
ctgtcggaggaaccgccgcgggaatcgtttctgccggacccctcggcgatcgccatcgct
cagctgaatcagatcgttgccgaccagaacgacctgttttcggacgtcgtcgatcgcgat
gacgatttgctgccgccgcttgccgagtcggttccgcagcgcgtgctgtgggatttcagt
gagagtcgtggggggtacctgtcgatccagccactgcttcagcaaaaaaagaaacgtggt
gacgggtacaccaaaggcaaaaagattcgattagaccacttgctaaacgatcgttcgatt
ccgctgtccgaagccgaccagcgggtggtgggcctgatcgaacggaacacaagctactac
agtcagtacgggtacgaattggatccggtggccgcgctcgaacagttggtcgggcaggac
aatgtcgcctgggaccgcgaaccgatccgtgtgcaaacctatccgaattatcttgccatc
ggatctgccgacgacagctttcgcattttgttctgcgacgaaatgggcggaacgttcctt
acccaagtgatcgtctcccgcgaagccttcttgcgattcgatttgcagaacaacaggatc
ctgatcggccacgcgaccgaggcggaatccgatttgattcgttccctggttcaattgccg
ccggtttcccggaatcgtctcgaagagttagttcagccgttggtcaagtttcagaagcgg
ttgtccgttctgttgccgccttcgaccgcgggcacgatccggttggccgaaggccgtccg
gcgattctgctgcgcagccgtgccgacggtcggctggatttcgggatccgtatccgcgac
gccgccggggtgttgcggcgtccgttgtccgatccgatggtggtggccaccgagattgac
ggtcagaaagtgcagctcgttcgcacggtgacgcacgaatccgaacagatcgaccggttg
cttgctcgttggggattgtcgatcgatcccgaagacgggttcgggacgatcgaagatttc
ggtgtcgcgttacgcttgatcgaggacctgcaatcgcccgaaagcgacgtcgaagttttg
tgggaccgcacgggtgagaagccggtcacggtgctcggcaatctgtccagcagcaacgtc
aaggtcgacatcaccaacaaacgcaactggttcggaatcaccggggaatgcacgttcggc
gaacattcgatgccgctgggcgacttgatcaacgggcttcccgacgacgatcaaacgggc
atcggcgattacatcaaactggccgacgggcagtgggctaggatctccgcggggctgcgt
cagcggctcaagcgactgcaggcggcaacgcacaccgatcgcaagacgcttaaactggac
gcgaccgcggccccggcgatccgcgaactggtcgatgccgacgtcgccgttaaagccagt
cgggcgtgggagaagtgcgtcaaacgtctggccaaagcggaaaagcttgacccggccgtg
ccgaaaggcttggatgccgatttgcgggactaccaggtcgacggcttcaagtggctgcgg
aaattggccgagtggggcgtcggcgggatcttggccgacgacatggggctgggcaaaact
ctgcaaaccctggccgtcctgttggatcgatccgccgacggcccggcgctggtgatcgcg
ccgaccagtgtcggattcaattggcagcgtgaagccgagcgattcgcacccggtttggac
gttcacttgtaccgagaaaccgaacgcggcgagttcctgccatcggtcggccctggttcc
ctggtgatctgcagctacggattggcgctgcgagatgccgaggcgcttgccggtgtgaat
tggtcaacgatggtgttggacgaagcccaggcgatcaagaacagccgcagcaaaaccagc
aaggcgatcgccgggatcgacgccgactggacggtcgcgctgacgggaacgccggtggaa
aaccatctcggtgaattgtggagcctgttccacgtcgtgtcgccgggtgtcttcggcggc
tgggagcattttcgcaaacgcttcgccgccccgatcgaaaaggaaggcagccagccggcg
cggcgggcattggccgaacgattgaaacccttcgtgttgcggcggaccaaatccgaagtg
ttgacggaattgccgccccgtaccgagatgaacctgtacgtcgacttgagtccggccgaa
cgcgccgagtacgagaaggtgcgtttggcggcgatcggcgaaatcgattcgatcgaagcc
ctgccacacatccaggatcaacgcttcaagatcctcgcgctgatgacccggttgcggcaa
atcgcctgccatgcgggtttggtcaacgagcagtggaccgattcgtcggccaagctggac
cagctctgtgaaacgctggacagcctgcgcgaggaaggtcaccgggcgctggtgttcagc
caattcaccgaacacttgggtttgatccgccgggcgctcgaggagcgtggattcagctac
cagtacttggacggatcgacgccggccaaggcccgccaggtggccgtcgacgaattccaa
tccggcagcgccgatgtcttcctgatctcgctgaaagccggcggaaccgggctgaatctg
accgcggccgactacgtgatccacatggacccctggtggaatccggccgtcgaagaccag
gcgaccgaccgggcccaccggatggggcaagacaaacccgtgatggtgtaccggatcgtc
gcccggggcacgatcgaagaagagattctggcgctgcacgaatccaaacgcgatctggtc
gccggcgtgatggaggggaccgaggcggccgccaaactgtccaacgacgacttgattcgc
atgctccgcggctga
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