Stieleria maiorica: Mal15_09910
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Entry
Mal15_09910 CDS
T09818
Symbol
rhlE_1
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
smam
Stieleria maiorica
Pathway
smam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mal15_09910 (rhlE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smam03019
]
Mal15_09910 (rhlE_1)
Enzymes [BR:
smam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mal15_09910 (rhlE_1)
Messenger RNA biogenesis [BR:
smam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mal15_09910 (rhlE_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Cas3-like_C_2
S_tail_recep_bd
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QEF96961
UniProt:
A0A5B9M727
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All DBs
Position
1435941..1437224
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AA seq
427 aa
AA seq
DB search
MKSFQEMELYRPLEKRLAELDYTVPTPIQAQTIPAAVEGKDILGCAQTGTGKTAAFALPI
LDYLGHDAPRAASGRPLVLVLAPTRELAIQIGQSFHTYGKHVRFRQTLVYGGVGQSEQVR
SLKKGAHVLIATPGRLIDLMDQGHVQLSDVEILVLDEADRMLDMGFMPAIKKIIAKLPDD
RQSLFFSATMPPKIRQLADQLLFNPFEVNVTPKTKSVAKIDQSVRMMERSEKVERLVKVL
RGDDVVRSIVFTRTKHGANALTRKLEKHQISAVAIHGNKSQSARQKALGAFRDNRISVLV
ATDVAARGIDIDDVTHVVNFDMPVDPESYVHRVGRTGRAGADGIAISFCTADEQDKLREI
EKLIGQPLRVQNPGAKLSEPTGNAAASRKPSGRNGLRSNGSPATGGHRHKKRYAKGGWNK
RRATAKA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatcatttcaagaaatggaattgtaccggccgctggaaaaacgattggccgaactg
gactacaccgtcccgaccccgattcaagcacaaaccatccccgccgccgtcgaaggcaaa
gacattttgggttgcgcccagaccggcaccggcaagacggctgcgttcgcgctgccgatc
ctggactacctgggccatgacgcaccgcgagccgcttccggtcgcccgctggtcctcgtc
cttgcaccgacccgcgagctggccattcaaatcggacagagttttcacacctatggaaaa
catgtccgatttcgccagaccctggtttacggcggtgtggggcaaagcgaacaggtgcgt
tcgctaaagaaaggcgcccacgtcttgatcgccaccccggggcgactgatcgatctgatg
gaccaaggccacgtgcagctttccgacgtggaaatcctggtcctggacgaagccgatcga
atgttggacatgggattcatgccggcgattaaaaagatcatcgccaagttgcccgatgat
cgccagtcactgttcttttcagcgacgatgccgccgaagatccgccaattggccgaccaa
ttgctgttcaacccgtttgaagtcaacgtgacgccgaaaaccaaaagcgttgccaagatc
gatcaaagcgtccgcatgatggagcgaagcgaaaaggtggaacgcctggtcaaggtactc
cgcggtgacgatgtggttcgatccatcgtcttcacccgcaccaagcatggtgccaacgcg
ttgacgcgcaaattggaaaagcaccagatcagcgcggtcgctatccacggcaacaaaagc
cagtcggcccgccagaaagcgctcggcgcgtttcgtgacaaccgcatctccgtcctggtc
gccaccgacgtcgccgcacgtgggatcgacatcgatgacgtcacccacgtcgtcaacttt
gacatgcccgtcgacccggaaagttatgtccaccgcgtcggccgaaccggacgcgccggc
gccgatggcatcgcgatctcgttttgcaccgcggatgagcaagacaagctccgcgagatc
gagaaactgatcggccaacccttgcgagtccaaaacccgggtgcgaagctgagcgagccg
accggcaacgcagcggcctctcgcaagccgagcggtcgcaacggattgcgatcaaacgga
tcacccgcaacaggcggccatcgccacaaaaagcgctacgcgaaaggcggctggaacaaa
cgccgcgcgaccgcaaaagcttaa
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