KEGG   Stieleria maiorica: Mal15_13740
Entry
Mal15_13740       CDS       T09818                                 
Symbol
rtcB_2
Name
(GenBank) RNA-splicing ligase RtcB
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
smam  Stieleria maiorica
Brite
KEGG Orthology (KO) [BR:smam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smam03016]
    Mal15_13740 (rtcB_2)
Enzymes [BR:smam01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     Mal15_13740 (rtcB_2)
Transfer RNA biogenesis [BR:smam03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    Mal15_13740 (rtcB_2)
 Prokaryotic type
   tRNA splicing ligases
    Mal15_13740 (rtcB_2)
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: QEF97334
UniProt: A0A5B9MCI9
LinkDB
Position
complement(1943855..1945327)
AA seq 490 aa
MMTVTGEALATLPAGADLSPITVIGTEPIRQSFGGETLTQAINSRRAPGVSRVVLNPDAH
VGYGAPVGCVMVSPTHIYPGPVGVDIKCSMSLLQMDLPADAIDALPLRKQIIRAICKRVP
TGAGRGQRHAPKSRSIDGKLGFKIATEGASKQVLKKLGIPKSWADACEDAYHTAPDGSSD
TLAARLEWMGRTRDKLDRIESKYRQLGSYGGGNHFGEAEVVHVLDSQRAIAEAFGLKDGC
VAFLSHCGSRGFGHDLAVAQFRTLKTAFQKQGLAFPAGDPQLVYAPVDSPEGRDYLCDMA
MGANFATVNHLLINDLVLEAFREVFPGVRGELVYFISHNIARQEPIDGTVQWVHRKGATR
ALPAGHPQLVGTRFESTGHPILLPGNPRDGSSVMVAGEGASAAAYSVNHGAGRRLSRTKA
KKQLVQHEIDQGLAEHDVVSNCSVYPRDEAPDAYKDFEEVLGSVRKAGLAEEVARLKAKF
VIKDGAAADD
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgatgacggtcaccggcgaggcgttggcgacgctgccggccggcgcggacctttcgccg
atcacggtgatcggaaccgagccgattcgtcaatccttcggcggcgaaacgctgacccag
gcgatcaacagtcgccgcgccccgggcgtttcgcgtgtggtgctcaatcccgacgcccac
gtcggctatggcgctccggtcggttgcgtgatggtttcaccgacgcacatttatcccggc
ccggtcggcgtggacatcaagtgcagcatgagtctgctgcagatggaccttcccgccgat
gcaatcgatgcgctgcccctgcgaaaacagatcattcgcgcgatctgcaaacgcgttccc
accggcgccggccgcggccaacgacacgcacccaagtcaagaagcatcgacggcaaactc
ggtttcaaaatcgcgaccgaaggcgcatcgaagcaggtgctgaagaaactcgggatccca
aagtcgtgggccgatgcctgcgaagatgcctaccacaccgcgcccgacggctccagcgac
acgctggcggcgcggctggagtggatggggcggacccgagacaaattggatcggattgaa
tccaagtatcgccaactaggtagctatggcggcggcaatcatttcggcgaagccgaagtc
gtgcacgtcctcgactcgcagcgcgcgatcgccgaagcctttggactcaaagatggctgc
gtcgcctttttgtcccattgcgggtcacgcgggttcgggcacgacttggccgtcgcgcag
ttccggacgttgaaaaccgcgtttcaaaaacaggggttggcgtttcccgccggcgatccc
caactggtttacgcccccgtcgattcacccgaaggccgcgattatttgtgcgacatggcg
atgggtgcgaactttgcaaccgtcaaccatctgctgatcaatgacctggtcctggaggcg
tttcgcgaagtctttcccggtgtccgcggtgaattggtctacttcatctcgcacaacatc
gcacgccaagaaccgatcgacgggacggtgcagtgggttcatcgcaaaggcgcgacgcgt
gccttgccggccgggcatccgcaattggtcggcacgcggttcgaatcgaccggacacccg
atcctgttgccgggaaatccccgcgacgggtccagcgtgatggtggccggcgaaggcgcc
tcggccgcggcgtatagcgtcaatcacggcgcgggacgacggctcagtcgcaccaaggcg
aagaaacagttggtacagcacgagatcgaccaggggctcgccgagcatgacgtggtcagc
aactgcagcgtctatccgcgtgacgaagcccccgatgcgtacaaggatttcgaagaggtg
ctcggcagcgttcgcaaagcgggattggctgaggaagtggctcggttgaaggcaaagttt
gtgatcaaagacggcgcggcggcggacgattag

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