Stieleria maiorica: Mal15_38930
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Entry
Mal15_38930 CDS
T09818
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
smam
Stieleria maiorica
Pathway
smam02020
Two-component system
smam02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
smam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Mal15_38930 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Mal15_38930 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smam03021
]
Mal15_38930 (rpoN)
Transcription machinery [BR:
smam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mal15_38930 (rpoN)
BRITE hierarchy
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LacI
HD_5
HTH_3
HTH_23
HTH_Crp_2
MarR
HTH_Tnp_ISL3
DUF745
Motif
Other DBs
NCBI-ProteinID:
QEF99826
UniProt:
A0A5B9MIJ3
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All DBs
Position
5501230..5502717
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AA seq
495 aa
AA seq
DB search
MSMGLQARMVQTQKLAPRMIQSMEILQLPMLALQERIEQEMNENPLLEQQETEPGSPEDG
DLAPSADTRSEDEKELVVDDNGDNSDDFERLQNMVAELPSTFDDSFRRSAGRMQEEADRR
HDLMANAQSRPESLNDFLLHQLAELDIDDDVERIAERIISTLDARDGGYLRTPLADLLPS
DHTAENYEVAERALKVVQSLEPTGIAARSLSECLLMQLRPEFEHYEEMEKLISSHLEDLA
ANRLPQIQKATGYSIELIQTVRAELQILNPKPGAAFMETYVPNVTPDIILEQDENGEYKI
TLDDDRVPSLYISEYYRRRLQDRSCTEEEREYIKRKINSAQWLIESIEQRRSTLTKVAEA
IVAHQKKFFDEGPEAIEPLKMQQIAEKVGVHVTTVSRAVNDKWMQTPRGIIPLHRLFVGG
TQTDDGEDVAWDTIRLKLQELIDGEDKRDPLSDESLVKKLAEEGMTVARRTVTKYRKRMG
IPSSRQRKDWSLAKK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgggcctgcaggcccgaatggtccagacccaaaagctggccccacggatgatc
cagtcgatggagattctgcaattgccgatgctggcgttgcaggaacgcattgaacaggag
atgaacgaaaaccccttgctggagcagcaggaaaccgagcctgggtcgcccgaagacggg
gacctagcaccttcggcggacacccgcagcgaggacgaaaaggagttggtcgtcgacgac
aacggcgacaattcggatgacttcgagcgactgcaaaacatggtcgccgagctgccgagc
acctttgacgattcattccgccgttccgccggccggatgcaagaggaagccgaccggcga
cacgacctgatggccaacgcccagtcgcggcccgagtcgctgaacgatttcctgcttcac
cagctggccgaattggacatcgatgacgacgtcgaacgcatcgccgagcggatcatcagc
acgctggacgcccgcgacggaggctacttgcggaccccgttggcggatctgctgccgagc
gaccacacggcggaaaactacgaggtcgccgaacgggcgctgaaggttgtccagtcgctc
gaaccgaccgggatcgccgcccgatcgttgagcgagtgtttgctgatgcagctgcgcccg
gaattcgagcactacgaggagatggagaaactgatcagttcgcacctggaggacttggcc
gccaaccgcttgccacagatccaaaaggcgaccggctattccatcgaactgatccagacc
gttcgtgccgaactgcaaatcttgaatcccaaaccgggcgcggcgttcatggaaacgtac
gtccccaacgtgaccccggacatcattttggagcaggacgaaaacggagagtacaagatc
acgctggatgacgaccgcgtgccgtcgttgtacatcagcgagtattaccgccgccggctt
caagaccgctcgtgcaccgaagaagaacgcgagtacatcaagcgaaagatcaacagcgcc
caatggctgatcgaatcgatcgaacagcgccgcagcacgctgaccaaagtcgccgaagcg
atcgtggcacatcaaaagaagttctttgacgaaggccccgaagccatcgaaccgctgaaa
atgcagcagatcgccgagaaggtcggcgtgcacgtgacgacggtcagccgggcagtcaac
gacaaatggatgcagacgccgcgcgggatcatccccttgcaccggctgttcgtcggcggc
acccaaaccgatgacggagaagacgtcgcctgggacacgatccgtttgaagctgcaagag
ttgatcgacggcgaagacaaacgcgatccgctgagcgatgaaagcctggtcaagaaattg
gccgaagaaggcatgacggtggcccgacgtacggtgaccaagtatcgaaaacgcatgggc
atccccagcagccgccaacgcaaagactggtcgctggcgaagaagtga
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