Stieleria maiorica: Mal15_59110
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Entry
Mal15_59110 CDS
T09818
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
smam
Stieleria maiorica
Pathway
smam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mal15_59110 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smam03021
]
Mal15_59110 (rpoC)
03400 DNA repair and recombination proteins [BR:
smam03400
]
Mal15_59110 (rpoC)
Enzymes [BR:
smam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mal15_59110 (rpoC)
Transcription machinery [BR:
smam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mal15_59110 (rpoC)
DNA repair and recombination proteins [BR:
smam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mal15_59110 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
RnfC_N
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QEG01830
UniProt:
A0A5B9MNB1
LinkDB
All DBs
Position
complement(8391464..8395870)
Genome browser
AA seq
1468 aa
AA seq
DB search
MSIGETSNYDRINDYASVRISLARPQDIKSWSFGEVKKPETINYRTYRPEKDGLFCERIF
GPEKDWECACGKYRGMKYKGMICDRCGVKVTHSRVRRKRMGHIDLAAPVVHIWFFKAMPS
RLGNLLNMKTSSLEKVIYFQDYVVVDPGQTDLEHQQLLTEEEFRAARQQYGPGSFEADMG
AEAVRKLLNQLDLVQLSEQLRIELDETGSKQKKKDLTNRLKIVESIRDSDNRPEWMVLDV
IPVIPPDLRPLVLLDSGNFATSDLNDLYRRIINRNNRLRKLVDLNAPEVIIRNEKRMLQQ
SVDALFDNNRCKRPVLGSSNRPLKSLTDMIKGKQGRFRENLLGKRVDYSARSVIVVGPRL
KLHQCGLPKKIALELYQPFIIRRLKELGHADTIKSAKKMLERKDEEVWDILEQVITNHPV
LLNRAPTLHRMGIQAFEPTLVEGNAINLHPLVCKGFNADFDGDQMAVHLPLSIEAQVEAH
TLMMSTNNVFAPSNGKPIMSPSQDIVMGCYYMTCELPDRKGEGMTFAGYDEVEFAYAQGI
VDLHAKIKMRLPKHQRLKTEDNDAKYGAIIETTPGRVRFNEMLPDGMDFYNRAMRSGDLA
GAISDCYQRLGRRPTIHLLDDMMQMGFRESTRSGLSFATDDLVTPESKVGFIKDAEKEVM
RLKKAYDRGQMADDERYNMVLDEWTKARELITTDMMAAMESDTRKGGWYINPVFLMSHSG
ARGGIAQIRQLAGMRGLMAKPTGEIIETPIKANFREGLSVLEYFSSTHGARKGLADTALK
TADSGYLTRKLADVAQNVVITMDDCGTTQGITKGVVYRGEKVEVRLADSINGRVSRKSIV
NPVTDEVVVGESEMITPEIARKIEQMGLEKLQVRSPMTCDAPLGVCRRCYGMDMSTGAMV
EEGMAVGIIAAQSIGEPGTQLTMRTFHIGGSVSKAMQESDIKSKKAGEVRLTRIRAVENA
DGRKVVLTRNGEIALVDDRGREFESYPIPTGSMLMVEDGQKVKPGETLCEWNPYSVPILS
EVSGKVRFEDIVEGETVRSEKEASGKMRMVVVDHKGDLHPQIVVEDNTGKALNVQFLPEK
ATISVVDGQDIVPGTVLAEMPRDSGGVSDITGGLPRVTEIFEARKPKDPAIIAEVDGEVE
IMPEKKRGKTTVIVRSESGIEREHLIPTGKHFLVHTGDMVKAGQSIVDGPLVPHDILRVS
GEEAVQQYLLHEIQQVYQSQKVEINDKHCEIIIARMLRKVKVESPGDTNLLPGLVIDRFQ
FRHANQELTKCIKIADAGDSDYSEGVIIPKDLFEETNAKIEAEGGTPMKGKKPKKATAST
QLLGITKAAVQSNSFISAASFQETTKVLTEAALAGKVDKLVGLKENVILGHLIPAGTGFR
LFQESEVNYRREALEALAEAPVQSLEESFPLLEAGDDVLGPGTPVAGASNDAEAAMQDLM
NDASTDAGASGDAQPPVGDGDSEAVLGE
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattggcgaaaccagcaactacgatcgcatcaacgattacgcgtcggtccgaatc
tccttggcccggccgcaggacatcaagagctggtcgtttggtgaagtcaaaaaaccggaa
acgatcaactaccggacctatcggcccgaaaaagacgggctgttctgcgagcgaatcttc
ggccccgaaaaagactgggaatgcgcctgcggcaagtaccggggcatgaagtacaagggc
atgatctgtgaccgctgcggcgtcaaggtcacccacagccgcgtccgccgcaagcggatg
gggcacatcgacctggccgccccggtcgttcacatctggttcttcaaagcgatgccgtcg
cggttgggcaacctgttgaacatgaagaccagctccttggaaaaggtgatctatttccaa
gactatgtggtcgtcgatccgggccagaccgacctggaacaccaacaactgctgaccgaa
gaagagttccgcgcagcccgtcagcaatacggcccgggaagcttcgaagccgacatgggt
gccgaagcggttcgcaaattgctgaaccaattggacctggttcaattgtccgagcagttg
cggatcgagctggacgaaaccggcagcaagcaaaagaagaaagacctgaccaaccggttg
aagatcgtcgaatcgatccgcgacagcgacaaccgtcccgagtggatggtgttggacgtg
atcccggtcattccgccggacctgcgtccgctggtgctgttggacagcggcaacttcgcg
accagcgatttgaacgacctgtaccgacggatcatcaaccgcaacaaccggctgcgaaag
ctggtcgatctgaacgcgccggaggtcatcattcgcaacgagaagcgaatgttgcagcaa
tcggtcgacgcgttgttcgacaacaaccgttgcaaacgcccggtgctcggttcatccaac
cgtccgctgaagtcgctgacggacatgatcaaaggaaagcagggtcgtttccgcgaaaac
ctgctcggcaagcgagtcgattactcggcacgaagcgtgatcgttgtcggcccgcgattg
aagttgcaccaatgcggtctgcccaaaaagatcgccctggagctctaccagccgttcatc
atccgccgcctcaaggagctcggccacgccgacacgatcaagtcggccaagaagatgctc
gagcgcaaggacgaagaagtctgggacatcctggaacaagtcatcaccaaccacccggtg
ctgctcaaccgggctcccacgctgcaccggatggggatccaggcgttcgagccgaccttg
gtcgaaggcaacgcgatcaacctgcacccgctggtttgcaagggattcaacgccgacttc
gacggtgaccagatggccgtccacctgccgctttcgatcgaagcccaggtcgaagcgcac
acgttgatgatgagtacgaacaacgtgttcgcaccgtccaacgggaaaccgatcatgagc
ccctcccaggacatcgtgatgggttgctactacatgacctgcgagcttcccgaccgcaag
ggcgaaggcatgacgttcgccgggtatgacgaagtcgaattcgcctacgcccaaggcatc
gtcgatctgcacgccaagatcaagatgcggttgcccaagcaccagcgtctcaagaccgaa
gacaacgacgccaaatacggcgcgatcatcgagaccacgccgggtcgggtccgcttcaac
gaaatgctgcccgacggcatggatttttacaaccgcgcgatgcgcagcggcgacttggcc
ggcgcgatcagcgattgctaccaacgactcggtcgccgcccgaccatccacctgctcgat
gacatgatgcagatgggcttccgcgaatcgacgcgcagcggcctgtcgttcgccaccgac
gacctggtcacgccggaatccaaagtcggcttcatcaaggacgccgaaaaagaagtcatg
cgtctgaagaaggcctatgaccgcgggcaaatggccgacgatgaacgctacaacatggtg
ctcgacgaatggaccaaggcccgtgaattgatcaccaccgacatgatggcggcgatggaa
tcggacacccgaaaaggtggctggtacatcaaccccgtcttcttgatgagccactcgggt
gctcggggtggtatcgcccaaattcgtcaattggctgggatgcgtggattgatggccaag
ccgaccggcgagatcatcgagacgccgattaaggcaaacttccgcgaaggcctgtcggtg
ttggaatacttcagttccacccacggtgcacggaagggtctggccgacacggcactgaaa
accgccgacagtggttacctgacccggaaactggccgacgtcgcgcaaaacgttgtcatc
accatggacgactgcggcacgacccagggcatcaccaagggcgtcgtctaccgcggtgaa
aaggtcgaagtccgcttggccgattcgatcaacggtcgcgtcagccgaaaatcgatcgtc
aacccggtcaccgacgaagtcgtcgtcggcgaaagcgaaatgatcacgcccgagatcgct
cgcaagatcgaacagatgggcctggaaaaactgcaagtccgttcgccgatgacctgcgac
gcgcccctgggcgtctgccgccgctgttacggcatggacatgtcgaccggtgccatggtc
gaagaaggcatggcggtcgggatcatcgccgcacaatccatcggtgaacccggaacgcag
ttgacgatgcggaccttccacatcggtggttcggtcagcaaggcgatgcaggagtcggac
atcaagagcaagaaggccggtgaagttcgcctgacacgaattcgtgcggtcgaaaacgcc
gacggccgcaaggtggttctgacgcggaacggcgaaatcgccctggtcgacgaccgcggg
cgtgaattcgaaagctatccgatcccgaccggttcgatgctgatggtcgaagacggccaa
aaggtcaaacccggcgaaacgttgtgcgagtggaacccctactcggtgccgattctgtcg
gaagtctccggtaaagtccgcttcgaagacatcgtcgaaggcgaaaccgtccgttcggaa
aaagaagccagcggcaagatgcggatggtcgtcgtcgatcacaagggcgacctgcacccg
cagatcgtcgtcgaagacaacaccggcaaagcgctcaacgtgcagttcctgcccgaaaaa
gcgaccatctccgtcgtcgacggacaggacatcgtgcccgggacggtgctcgccgaaatg
ccgcgtgacagcggtggtgtctccgacatcaccggcggtctgccgcgagtcaccgagatc
ttcgaagctcgaaaaccgaaggacccggcgatcatcgccgaagtcgatggcgaagtcgaa
atcatgcccgaaaagaaacgcggcaagacgaccgtcatcgtccgcagcgaatcgggaatc
gaacgcgaacacttgatccccaccggaaagcacttcctggtgcacaccggggacatggtc
aaagccggccagtcgatcgtcgacggtccactggtcccgcacgacatcctgcgggtctcc
ggcgaagaagccgtccagcaatacctgctgcacgaaatccaacaggtctatcagtcgcag
aaggtggagatcaacgacaaacactgcgaaatcatcatcgcgcgaatgctgcgaaaggtg
aaggtcgaatcgcccggcgacaccaacctgttgcccggtctggtgatcgaccgattccag
ttccgacatgccaaccaagaactgaccaagtgcatcaagatcgccgatgccggcgacagc
gattacagcgaaggcgtgatcattccgaaggacttgttcgaagaaaccaacgccaagatc
gaagccgaaggcggcaccccgatgaagggcaaaaagccgaagaaggcgaccgccagcacc
caattgctggggatcaccaaggcggccgtccagtccaactcgttcatctccgccgcgtcg
ttccaggaaacgaccaaggtcttgaccgaggcggcgctggccggcaaggtcgacaaactg
gtcggtttgaaagagaacgtgatcctgggacacctgatcccggccggtaccggtttccgc
ctgttccaagaatcggaagtcaactaccgccgcgaagcactcgaagcgttggccgaagcc
cccgtgcaaagcctggaagagtcgttcccgctgctggaagccggcgacgatgttctgggc
cccggcaccccggtcgccggagcctccaacgacgccgaagcagcgatgcaagacctgatg
aacgacgcgtcgaccgacgcgggtgcctccggcgatgcacaaccgccggtcggcgacggt
gacagcgaagccgttctcggcgaatag
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integrated database retrieval system
