Solibaculum mannosilyticum: C12CBH8_07710
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Entry
C12CBH8_07710 CDS
T07247
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sman
Solibaculum mannosilyticum
Pathway
sman03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sman00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C12CBH8_07710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sman03019
]
C12CBH8_07710
03400 DNA repair and recombination proteins [BR:
sman03400
]
C12CBH8_07710
Enzymes [BR:
sman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C12CBH8_07710
Messenger RNA biogenesis [BR:
sman03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C12CBH8_07710
DNA repair and recombination proteins [BR:
sman03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C12CBH8_07710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
BCI60132
UniProt:
A0A7I8D330
LinkDB
All DBs
Position
862031..863575
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AA seq
514 aa
AA seq
DB search
MTLSPDLTEQKYSTLKQIFGYDSFRPGQEDIVNHLLGQGDALAVMPTGAGKSICYQLPAL
LMPGVTVVVSPLISLMKDQVQALIQMGVRAAYINSSLTEGQCRKALSNASQGMYKIIYVA
PERLLTPSFLRFAHSISISLLCVDEAHCVSQWGQDFRPSYLQIREFIAALPNRPPVGAFT
ATATAHVRKDILQMLDLQDPLEVITGFDRPNLYFEVQRLQDRDKMAALKVYLDAHPDRCG
IVYCSTRKKVDQVYTHLTDMGVSAARYHAGLEDSLRQQNQDDFLFDKVRVMVATNAFGMG
IDKSNVGFVVHYNMPLDLESYYQEAGRAGRDGQPADCILLYSASDVRTGNFLIDNSSPKA
GVDQEELEALRNRQRERLKQMTFYCHSKYCLRGEMLRYFGQRQKQPCGNCSICLPGQEKA
NVVAVRAAQEKKRIQVEEKNLDPELWQTLKKLRLDLARRAGVPAFVVFTDATLRQMCALC
PTTEQQFLQVPGVGARKCQQYSKYFLPLFKAYKG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaccctttctccagatctgacagaacagaaatacagtactttaaaacaaatattcgga
tacgatagctttcgtcccgggcaagaggacatcgtcaaccacttgttgggacaaggggat
gccttagccgtgatgcccactggtgcagggaaatccatctgttatcaattgccggccctg
ttgatgcctggcgtgacggtggttgtgtctccgctcatcagcctgatgaaagatcaggta
caggcgcttatccagatgggggtaagggcggcctacatcaattcctcccttacggaggga
caatgtagaaaagccctgtccaatgccagccagggcatgtataaaatcatctatgtggcg
ccggagaggctgttgacgcccagtttcctgcggtttgcgcacagtatatccatttctctt
ttgtgcgtagatgaggctcactgcgtatcccaatggggacaggatttccgtcctagttat
ttacaaatccgggaattcatcgcagcactccccaaccgtccgccggtaggggcttttacc
gccactgccacggcccacgtccgcaaggatattttacagatgctggacttgcaagatccc
ctggaggtcattacaggatttgaccgtcccaatctttactttgaagtgcagcgtttgcag
gaccgggacaaaatggcggctttaaaggtgtatctggacgcccatcccgaccgatgcggt
atagtgtattgttccacccgaaaaaaggtggatcaagtgtacacgcatctcactgatatg
ggagtgtccgccgcccggtaccacgctggtttggaggactccttaaggcagcagaatcaa
gacgatttcctgtttgataaagttcgcgttatggtggccaccaatgcctttggcatggga
attgataaatccaacgttggatttgtggtccattacaacatgccgttggatttggagagt
tactaccaggaggccggaagggccggacgggatggacaacctgccgactgtattttactc
tatagtgcgtccgatgtgcgcacaggaaactttctcattgacaatagttctccaaaagcc
ggagtggaccaagaggagttggaagctctgcgcaaccgtcagcgggagaggctcaagcag
atgaccttttactgtcacagcaaatactgtttgagaggggaaatgctccgatactttgga
cagaggcaaaaacagccctgtgggaattgttcgatttgcctgcccggccaggaaaaagcc
aatgtcgtggcggtacgggcggcacaagaaaagaaaaggattcaggtggaggagaagaat
ctggatccggaactgtggcaaacgctcaaaaagttgcgtctagacttggcgcgacgggcg
ggagtaccggcctttgtggtgttcactgatgccacattgcgccagatgtgtgctctttgt
cccacaacggaacagcagtttttacaggtgccgggcgtaggggcgcggaaatgccagcaa
tatagcaagtactttttgcctctttttaaggcgtacaaaggataa
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