Solibaculum mannosilyticum: C12CBH8_08230
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Entry
C12CBH8_08230 CDS
T07247
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sman
Solibaculum mannosilyticum
Pathway
sman03410
Base excision repair
sman03430
Mismatch repair
sman03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C12CBH8_08230
03430 Mismatch repair
C12CBH8_08230
03440 Homologous recombination
C12CBH8_08230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sman03400
]
C12CBH8_08230
DNA repair and recombination proteins [BR:
sman03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C12CBH8_08230
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C12CBH8_08230
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C12CBH8_08230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BCI60184
UniProt:
A0A7I8D6A5
LinkDB
All DBs
Position
922223..924271
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AA seq
682 aa
AA seq
DB search
MSRKKWVLAGYNKQIAKELYGSSQFSEILSILLAERGFTDAQKAGQYLTCQADLCDPFTL
LDMDKAVQRIERALDQFERIAVYGDYDADGVTATALLYQYLSSREADVLYYIPEREGEGY
GLHASSIDALHEQGVSLIVTVDNGISALDEVAYASSLGIDVVITDHHQPGDVLPQAVAVV
DPHRIDCPSPFKDFAGVGVAFKLVQALEGEDPSMALDQYADLICIGTIGDVVPLTGENRA
LVGRGLKDLTQGSRFGIQAMLDAAGLGGRELTGANVAFILAPRINAAGRVDSPKLAARLL
LAEDEEEAEGLAFQLEDANRKRQQIEGEISLEVQEMLTKEPERALDRVIVLAGQGWHKGV
IGIVASRLVEQYGRPCILLSIEGDTAQGSGRSIAGFSLYRALDQSSQYLLRFGGHTMAAG
MTLKVDQVESFRQAVNDYAASIEPFPIPELKLDCRLRPSALSIEAIRDLSMLEPFGSGNP
KPVFGLCSMRLEEVQPLGGGKHVRMLLSRDGHTVSAVQFREEFDRFPYQVGEVLDAAVQL
EENQYRGDVSLSVFVKDIRHHGLDVVAYLEQKRVYERYRRGEEMAKEQWMVLYPKREQMA
KIYRCLRAIGQFYGPCDILWNRLEGIHCATLLVALDVLDEMGLLNHSLSGDILEVQMNPA
DQKVDLNQSIILNQMKNHAEVR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgcaaaaaatgggttttagccggttataataaacaaatagccaaggagttgtat
ggatccagccagttttcggagatcctcagcatccttctagccgaacgcggctttaccgat
gcacaaaaggctgggcagtatttaacctgtcaggcagatttgtgtgatccgtttactctt
ctggatatggacaaagcagtccagcgtattgagcgcgctctggatcaatttgaacgcatt
gctgtttatggcgattacgatgcggacggcgtgacagccactgctctgttgtatcaatat
ttgtcgtcccgtgaagccgacgtgctttactacattcccgaacgggaaggagaaggatat
ggccttcacgcttcttccatcgatgcccttcatgaacagggggtatcgctcatcgtcaca
gtggacaacggcatttcagccctggatgaggtagcctatgcgtcatccctaggcatcgat
gtggtcattaccgatcatcatcagccgggggatgtattgccacaagcagttgcagtggtg
gatccccatcggatagactgtcccagtccattcaaggattttgccggcgtaggggtggcg
tttaaactggtacaggctttggagggcgaagatccttctatggctctcgatcagtatgcc
gatctcatttgtatcggtaccattggggatgtggtgcctctcacaggagaaaaccgggcg
ttggtgggccggggcctgaaggatctgacacagggtagccgattcgggatccaggcaatg
ctggacgctgcaggcctcggtggacgggagttgaccggagcgaatgtagcgtttatttta
gctccccgcatcaacgccgccggacgagtggattctcctaagctggcggcgcgtctgctg
ctggcggaggacgaagaggaagccgaagggttagcctttcagctcgaggatgccaatcgt
aagcgccagcagattgaaggggaaatttcccttgaggtgcaggagatgcttaccaaagag
ccggaacgtgccttggatcgggtcattgttttggccgggcaaggatggcacaaaggagtt
atcggcattgtggcatcccgactagtggagcaatatggccggccgtgtatcctcttgtcc
atagaaggggataccgcccaaggttcaggccgcagcattgctggattttcactttacagg
gctttggatcaaagcagccagtatcttctccgctttggtggacacaccatggcggcagga
atgacattaaaggtcgatcaagtggagtccttccggcaagctgtcaacgactatgcggct
agtatagagccatttcccattccagaattaaaactggattgccgattgaggccgtcggcg
ctgtccatcgaggccatccgggatttgtccatgctggaacccttcggttcaggcaatccc
aaaccggtgttcggattatgctctatgcgtctggaggaagtccaacctttgggcggaggc
aaacatgtacgtatgctcttatcccgggatgggcacaccgtatcggccgtgcagttccgc
gaagaattcgaccggttcccttatcaggtgggagaggtactggatgcggccgtccaactg
gaggagaaccaataccgcggtgatgtgagtttatcggtgtttgtcaaagacatccgtcat
cacggcttggatgtagtagcctatttggaacaaaaacgagtgtacgagcgctatcgacgc
ggtgaagagatggcaaaagaacagtggatggtcctgtatcccaaaagggagcagatggcc
aagatttaccgttgtctgcgggctataggacaattctacggcccctgcgatattctgtgg
aaccgtctggaaggcatccactgtgcgacgttgttggtggcgttggacgtcctggacgag
atgggattgttgaaccattcgctttcaggtgatatcctggaagtacagatgaatccggct
gatcaaaaggtggatttaaatcaatcgattattttgaaccagatgaaaaaccatgcagaa
gtgaggtga
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