Solibaculum mannosilyticum: C12CBH8_08460
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Entry
C12CBH8_08460 CDS
T07247
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sman
Solibaculum mannosilyticum
Pathway
sman03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sman00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C12CBH8_08460 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sman03019
]
C12CBH8_08460 (groL)
03110 Chaperones and folding catalysts [BR:
sman03110
]
C12CBH8_08460 (groL)
03029 Mitochondrial biogenesis [BR:
sman03029
]
C12CBH8_08460 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sman04147
]
C12CBH8_08460 (groL)
Enzymes [BR:
sman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
C12CBH8_08460 (groL)
Messenger RNA biogenesis [BR:
sman03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C12CBH8_08460 (groL)
Chaperones and folding catalysts [BR:
sman03110
]
Heat shock proteins
HSP60 / Chaperonin
C12CBH8_08460 (groL)
Mitochondrial biogenesis [BR:
sman03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
C12CBH8_08460 (groL)
Exosome [BR:
sman04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C12CBH8_08460 (groL)
Exosomal proteins of other body fluids (saliva and urine)
C12CBH8_08460 (groL)
Exosomal proteins of breast cancer cells
C12CBH8_08460 (groL)
Exosomal proteins of colorectal cancer cells
C12CBH8_08460 (groL)
Exosomal proteins of bladder cancer cells
C12CBH8_08460 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
BCI60207
UniProt:
A0A7I8D0B7
LinkDB
All DBs
Position
954765..956393
Genome browser
AA seq
542 aa
AA seq
DB search
MSKEIRFGAEARQALQAGIDKLADTVKITLGPRGRNVVLDKKFGAPLITNDGVTIAKEIE
LDDAFENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIVREGMKNVTAGANPMILKKGIQ
KAVDAAIETVKSHCQKVSGSEDIARVATVSAADEVIGKLIAEAMEKVSADGVITVEDSKT
AETYTEVVEGMQFDRGYISPYMVTDTDKMEAVIDDAYLLITDKKISNIQDILPLLEQIVN
AGRKLVIIAEDIEGEALTTLLLNKLRGTFVCVGVKAPGFGDRRKEMLQDIAILTGGQVIS
EEVGLELKTTTMEQLGRAGQVKVQKENTIIVNGAGDSEAIKARVAQIRAQIETSTSEFDK
EKLHERLAKLAGGVAVLKVGAATEVEMKEKKLRIEDALSATKAAVEEGIVAGGGVALLNA
IPEVRKLLDTTDGDEKTGVKIVLKALEEPVRQIAANAGLEGSIIVDKIVNSGKPRFGYDA
LHEEYVDMINAGIVDPVKVTRSALQNAASVAAMVLTTESLVADKKEPNPPAAPAAPDMGG
MY
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggaaatccgttttggcgcagaagcccgtcaggctttgcaggccggcatcgat
aagctggctgataccgtaaaaatcaccttgggtccgagaggccgcaatgtggtgctggat
aagaaattcggcgctcccctcatcaccaacgacggcgttaccatcgccaaggagatcgag
ctggacgacgcttttgaaaatatgggtgctcagctggtcaaagaagtggccaccaagaca
aatgatgtggccggcgacggtactacgaccgctactctgctggctcaggccattgtccgc
gagggcatgaagaacgtcactgccggagccaatcctatgatcctgaaaaagggcatccag
aaggctgtagacgccgccatcgagacggtgaaatcccactgccagaaagtcagcggctct
gaggatatcgcccgtgtagccacggtatcggccgctgatgaagttatcggtaagttgatc
gctgaggccatggaaaaggtatctgccgacggcgttatcactgttgaggattccaaaacc
gccgagacctacaccgaagtggtggaaggcatgcagtttgaccgcggctatatctccccc
tacatggttaccgataccgacaagatggaagctgttatcgacgacgcttacctgctgatt
accgacaagaagatttccaacattcaggatattttgcccttgctggaacagatcgtcaac
gctggccgtaaactggtcatcatcgccgaagatatcgaaggcgaggctctgaccaccctg
ctgctcaacaagctgcgcggtacctttgtctgcgtaggcgtcaaagctccgggcttcggt
gatcgccgcaaggagatgctgcaggatatcgccatcctcaccggcggtcaggtcatttcc
gaagaagttggtctcgaactcaagaccactactatggagcagttgggccgtgccggtcag
gtcaaggtgcagaaagagaataccatcatcgtcaatggcgccggtgactccgaggctatc
aaggcccgtgtagctcagatccgcgctcagatcgaaacctccacttcggagttcgacaaa
gagaaactgcatgagcgtctggctaaactggcaggcggcgtagccgtcttgaaggtcggc
gctgcaactgaggtagagatgaaggagaagaaactccgcatcgaagatgctctgtccgct
accaaggctgctgtggaagaaggcattgttgccggcggcggcgtggctctgctcaacgcc
attcctgaggtccgcaagctgctggataccacggatggcgatgaaaagactggcgttaag
attgtcctgaaagctctcgaagagccggttcgtcagatcgctgccaacgctggtctggaa
ggttctatcattgtggataagatcgtaaattccggcaaacctcgctttggttacgatgct
ctgcatgaagagtatgtggatatgatcaatgccggtatcgttgatccggttaaggttaca
cgttcggccctgcagaatgcagcttctgtggccgctatggtgttaactaccgagtctctg
gttgccgataagaaggaaccgaatcctcctgcagctcctgctgcacctgatatgggcggc
atgtattaa
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