Solibaculum mannosilyticum: C12CBH8_15690
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Entry
C12CBH8_15690 CDS
T07247
Symbol
ligT
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sman
Solibaculum mannosilyticum
Brite
KEGG Orthology (KO) [BR:
sman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sman03016
]
C12CBH8_15690 (ligT)
Enzymes [BR:
sman01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
C12CBH8_15690 (ligT)
Transfer RNA biogenesis [BR:
sman03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
C12CBH8_15690 (ligT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
BCI60930
UniProt:
A0A7I8D268
LinkDB
All DBs
Position
complement(1684554..1685096)
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AA seq
180 aa
AA seq
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MRLFYAIDFPEEIKSALMRYQSDLRSIGTTGRFVRRDTLHLTLHFLGETPPSQLMKAKKA
ADQAAATCAPFSLCTASPGSFAKGRGGEVLWLGLEPCKALLDVQGQLEDCLERQEFKKDT
KPYRPHITMARDADWSTDLPKLDPLTIPADGITLFESRRDVSTGRYRYIPLHIASFCGEA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgagactgttttatgccatcgatttccctgaggagatcaaaagcgccctgatgcggtat
cagtctgatttgcgcagtatagggacaacaggacgatttgtacgtcgggatacccttcat
ctaacccttcatttcctgggagaaacgccgccttcccagcttatgaaggcaaaaaaagca
gctgatcaagcagctgcgacatgcgcaccgttttccttgtgcaccgcttctcccggcagc
tttgctaagggaaggggaggagaagtgctctggctgggccttgagccgtgcaaagccctg
ctggatgtacaaggtcaactggaagactgtttagagaggcaggagtttaaaaaggataca
aaaccgtaccgtccccatatcacgatggctcgggatgccgattggtcaaccgatttgcca
aaattagatcctttaaccataccggctgatggcattacgctgtttgaaagccggagggat
gtttccactggacgataccgatatatcccactccacatagcatccttctgtggagaagca
taa
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