Solibaculum mannosilyticum: C12CBH8_16850
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Entry
C12CBH8_16850 CDS
T07247
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sman
Solibaculum mannosilyticum
Pathway
sman03030
DNA replication
sman03430
Mismatch repair
sman03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C12CBH8_16850 (dnaE)
03430 Mismatch repair
C12CBH8_16850 (dnaE)
03440 Homologous recombination
C12CBH8_16850 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sman03032
]
C12CBH8_16850 (dnaE)
03400 DNA repair and recombination proteins [BR:
sman03400
]
C12CBH8_16850 (dnaE)
Enzymes [BR:
sman01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C12CBH8_16850 (dnaE)
DNA replication proteins [BR:
sman03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C12CBH8_16850 (dnaE)
DNA repair and recombination proteins [BR:
sman03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C12CBH8_16850 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
Pou
DUF6282
Agarase_CBM
Motif
Other DBs
NCBI-ProteinID:
BCI61046
UniProt:
A0A7I8D2N0
LinkDB
All DBs
Position
complement(1840647..1844147)
Genome browser
AA seq
1166 aa
AA seq
DB search
MGFCHLHVHSEYSLLDGACRIEGLVERAAALGQKAVAITDHGVMYGAVDFYKAAKKHGIQ
PIIGCEVYVAARKRTDRVHGLDRENNHLILLCKNETGYKNLLQLVSRAFTEGFYGKPRVD
HELLEQYHEGLICMSACLAGEIPRALVRGDYDAAKRTALWYNQVFGEGNYYIELQNHGIQ
EQQDILPDLIRLSRETGIPMAATNDAHYLTREDSRLQHVLLCIQLNKTVNEDIGMEFPTD
EFYIKSEEEMAALFSDVPEAIENTVKIAQQCSFDFEFGNTKLPYFQVPDGKDAYTYFREM
CYQGLTRHYGDHPEESLVQRLDYELETIRSMGYVDYFLIVHDFVRYAKENGIPVGPGRGS
GAGSLAAYCIGITGIDPMRYNLLFERFLNPERVSMPDFDIDFCYERRQKVIDYVVEKYGD
DHVAQIITFGTMASRAAIRDVGRALGVAYATVDSVAKLVPFELKMTIDRALKVSPELKAR
YDAEPEIKNLIDTARKLEGMPRHASTHAAGVVITRDPVASYVPLAKNDESVVTQYTMTTL
EELGLLKMDFLGLRTLTVLYDAAEMVKRHTPDFDLEKISLEDEEVFRMLAAGQTEGVFQF
ESGGMRQVLVQLGPRSVEDLIAVISLYRPGPMDSIPRYIENRHHPENITYRHELLRPIMD
VTYGCLIYQEQVMQVFRSLAGYSYGRADIVRRAMSKKKHDVMEKERKNFIYGLEREDGTL
ECEGCIRRGVDEQTANTIFDEMSSFASYAFNKSHAAAYATVSYQTAYMKCHHPREFMAAL
LTSVLDSATKVSGYIVECQKLGIKVEPPSVNLSFEGFTVTGKEIRFGLLAVRNLGRGFIR
NLLAERDAGGPFTSFYDFCKRMQGKDLNRRTIESLIKCGALDGLGANRRQMLSSVDKMLD
SLEASRRRNVDGQMGLFDLSEEISDDGPELPVMEEMSIADLLTLEKETTGLYLSGHPMAE
YAQTAEKLGAARIGDIVEQAGESGSLYQDGSEVKLLALLDSVRLKTTRNNSTMAFVNLED
MYGAIEMLVFPRTLMEFGQQLQDGQVMVIHGKISAREDEDPKIICERVVPLSEAEMEGQS
EDNTIPRPAVKQARTGLYLRLPTKDGDHFRRVMDIASLFDGGVPLYLHFADTGKTVLAPR
TSWVDVNEPMLQEVYHILGKNNVVLK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgggattttgccatctgcatgtacatagtgaatacagccttttggacggcgcatgccgc
atcgaggggctagtggagagagccgctgcgctggggcagaaggctgtggccatcaccgac
cacggcgtgatgtacggcgcagtggatttttataaagcggctaaaaagcacggtatccag
cccatcatcggatgcgaggtatacgtagcggcccgcaagaggactgatcgggtccacggt
ctggatcgggaaaacaatcacctgatcctgctttgtaaaaacgagaccggctataaaaac
ttgcttcaactggtgtccagggcctttaccgagggcttctacggcaagccgagggtggat
catgagctgctggagcaataccatgagggactgatttgtatgtctgcctgcctggcggga
gagatccctcgggctttggtgcgtggggactacgatgcagccaagcggacggcactttgg
tacaaccaggtgtttggcgagggcaattactacattgaattacagaaccacggcatccag
gagcagcaggatattttacccgatctcatccgcctttcccgggagacggggattcccatg
gccgccaccaatgacgcccattatctcacccgggaggacagccgtctccagcacgtgcta
ttgtgtatccagctcaataagacggtgaatgaagacatcgggatggaattccccaccgat
gaattttacatcaagagcgaggaggaaatggcggccctgttttccgatgtgccggaagcc
attgagaacaccgtcaaaatagcacaacagtgcagcttcgactttgaattcggcaataca
aaactgccttacttccaggtgccggacggcaaggatgcctacacctatttccgtgagatg
tgttatcagggccttacccgccactatggggaccatccggaggaatcccttgtccagcgg
ctggattacgagttagagaccatccggtccatgggatatgtggactacttcctcattgtg
catgacttcgtgcgttacgccaaggaaaacggcattccggtgggcccgggacgcggatcg
ggagccggatcattggcggcatattgtatcggcatcaccggcatcgatcccatgcggtat
aatctgctgtttgagcgattcttaaatcctgagcgggtcagtatgccggacttcgacatc
gacttctgttatgaacgccgccaaaaggtcatcgactatgtggtggagaagtacggcgac
gatcatgtggcccagatcatcacctttggaaccatggcgtcccgcgccgccatccgggat
gtgggacgtgccttaggggtagcctatgccacggtggattcggtggcaaagctggtgccc
ttcgagctgaagatgaccatcgaccgggcgctgaaggtctccccggaactcaaagcccgg
tacgatgcggaaccggagattaagaatctcatcgacaccgcccggaagctggagggtatg
ccgcggcatgcctctacccatgcggccggtgtggtcatcaccagggacccggtggccagt
tatgtgccgcttgccaaaaacgatgaatcggtggtcactcagtacaccatgaccactctg
gaggaactgggcctgctcaagatggatttcctgggccttcgcacgctgacggtgctgtat
gacgcggcggaaatggtcaaacggcataccccggactttgacttggagaaaatctccttg
gaggatgaagaggtctttcgtatgttggccgccggtcagaccgaaggggtattccaattt
gaatcgggaggcatgcgccaggtgctggtacagctgggtccgcgttcggtggaggatctc
atcgccgttatctccctttaccgtcccggccccatggactccatcccgcggtacatcgaa
aaccgccatcatccggagaacatcacctatcggcacgagctgctgcgccccattatggat
gtgacctacggctgtctgatttatcaggaacaggtcatgcaggtgttccgcagcttggcg
ggatactcttacggccgagccgacatcgttcgccgtgccatgtccaagaaaaagcacgat
gtcatggagaaggaacgcaaaaacttcatctacggtttggagagagaagacggcacattg
gagtgtgagggatgtatccgccgcggcgtggatgaacagacggccaacaccatctttgac
gagatgtcatcctttgcgtcgtatgcctttaacaaatcccatgccgccgcctatgccacc
gtatcttaccagacggcttacatgaagtgccaccatcctcgggaatttatggcggcgctg
cttaccagcgtcttggactcggccaccaaggtgtcgggctacattgtggagtgccaaaag
cttggcatcaaggtggaaccgccgtcggttaacctgagctttgaagggttcaccgtcacc
ggcaaggagatccgatttggactcctggcggtgcgcaatttgggacggggattcatccgc
aatttgctggccgaacgggatgctggaggaccctttacctccttctacgacttctgcaag
cgcatgcaagggaaggatctcaaccgccggaccattgaaagcctgatcaaatgcggcgca
ctggacggtcttggagccaaccgccggcagatgctctcgtcggtggacaagatgctggac
agcttggaggcgtcccgccgccgcaatgtagacggacagatgggtctttttgatttgtcg
gaggaaatcagtgacgatgggccagaactgcctgttatggaggaaatgtccatcgccgat
ttgctcacattggaaaaggagaccacagggctttatctttccggacatcccatggcggaa
tacgcccagacggcggaaaaattaggagccgcccgtatcggcgatattgtggagcaggca
ggggaatcgggtagcttatatcaagatggaagcgaagtaaagctgttggcgttgctggat
tcggtccgtctcaagacgacccgcaacaattctactatggcttttgtcaatctggaggat
atgtacggcgccattgaaatgctggtctttccccggacgcttatggagttcggccagcag
ttgcaggacggccaggtgatggtcatccacggcaagatcagcgcccgtgaggatgaggat
cccaaaattatttgtgaacgggtagtgcccttgtccgaggcggagatggaaggacagagt
gaagataatacgattccacgtccagccgtcaaacaggcccggacaggcttgtatctgcgt
ctccccaccaaggacggtgatcattttagacgggtgatggatattgcatccctgtttgat
ggaggcgttccgttgtatcttcattttgcagatacgggaaaaaccgtgttggctccccgg
acgtcctgggtggacgtcaacgagccgatgttgcaggaagtataccatattctgggaaaa
aacaatgtggtattaaaatag
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