Streptomyces marincola: CAG99_02035
Help
Entry
CAG99_02035 CDS
T08123
Name
(GenBank) DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
smao
Streptomyces marincola
Pathway
smao03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CAG99_02035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smao03400
]
CAG99_02035
Enzymes [BR:
smao01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CAG99_02035
DNA repair and recombination proteins [BR:
smao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CAG99_02035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_C
DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID:
ARQ67771
UniProt:
A0A1W7CSJ6
LinkDB
All DBs
Position
519133..520125
Genome browser
AA seq
330 aa
AA seq
DB search
MDEIPEAVPPMLAVEGELPTGPWAYEYKWDGYRCCLRAAPDGTTRLTSRNGNDLTAAYPE
LTGLPPAAFCGLATVLDGEVVALDPAGRPDFGLLQRRRRQRPAGGRAAPGVTYFAFDLLR
SGGTDYLRAPYTERRSALLRLAAAAEPAAEGRIAVPPHYTADAIAPLDLLGVARRHGLEG
LMAKRLDSPYLPGHRSRSWVKRPLVRTQEAVIGGWQPGAGRRSGTVGSLLLGAHDAAGDL
RYIGHVGSGFTGAALADLLRRLTPLARATSPFAGPVPPVHARTARWCRPRLVGEVAFRAW
TRDGRLRQPSWRGLREDKSPAQAVLPPPPG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggacgagattcccgaggcggtgcccccgatgctggccgtcgagggcgaactgcccacc
ggtccctgggcgtacgagtacaaatgggacggctaccgctgctgccttcgggccgcgccg
gacggaaccacccgcctcaccagccggaacggcaacgacctcacggccgcctacccggag
ctgaccggtctgccgccggccgcgttctgcggcctggccaccgtgctcgacggcgaggtg
gtggcgctcgaccccgccggccgccccgacttcgggctgctccagcgccgccggcggcaa
cgccccgccggcgggcgggcggctcccggcgtcacctacttcgcgttcgacctgctccgc
tcgggcggcaccgactacctgcgcgccccctacaccgaacgccggtcggcgctcctgcgc
ctggccgccgcggcggaaccggccgccgagggccggatcgcggtgccgccgcactacacc
gcggacgccatcgcccccctcgacctcctcggcgtcgcgcggcggcacggcctcgaagga
ctgatggccaagcgcctcgactcgccctacctgccgggtcacaggtcgaggtcgtgggtc
aaacggccgctcgtgcgcacccaggaggccgtgatcggcggctggcagcccggcgccgga
cggcgttccggcacggtcggctcgctgctgctcggcgcccacgacgcggccggggacctg
cgctacatcgggcacgtcggcagcggcttcaccggggcagcgctcgccgacctgctgcgg
cggctcaccccgctggcccgcgccaccagcccgttcgccggtcctgtgccccccgtccac
gccaggaccgcccgctggtgccggccgcgcctggtcggcgaggtcgccttccgggcctgg
acccgggacggcagactgcggcagccctcgtggcgcggcctgcgcgaggacaagtcgccg
gcgcaggccgtcctgccgccgcctcccggctga
DBGET
integrated database retrieval system