KEGG   Streptomyces marincola: CAG99_02035
Entry
CAG99_02035       CDS       T08123                                 
Name
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
smao  Streptomyces marincola
Pathway
smao03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:smao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CAG99_02035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smao03400]
    CAG99_02035
Enzymes [BR:smao01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CAG99_02035
DNA repair and recombination proteins [BR:smao03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CAG99_02035
SSDB
Motif
Pfam: DNA_ligase_A_C DNA_ligase_A_M
Other DBs
NCBI-ProteinID: ARQ67771
UniProt: A0A1W7CSJ6
LinkDB
Position
519133..520125
AA seq 330 aa
MDEIPEAVPPMLAVEGELPTGPWAYEYKWDGYRCCLRAAPDGTTRLTSRNGNDLTAAYPE
LTGLPPAAFCGLATVLDGEVVALDPAGRPDFGLLQRRRRQRPAGGRAAPGVTYFAFDLLR
SGGTDYLRAPYTERRSALLRLAAAAEPAAEGRIAVPPHYTADAIAPLDLLGVARRHGLEG
LMAKRLDSPYLPGHRSRSWVKRPLVRTQEAVIGGWQPGAGRRSGTVGSLLLGAHDAAGDL
RYIGHVGSGFTGAALADLLRRLTPLARATSPFAGPVPPVHARTARWCRPRLVGEVAFRAW
TRDGRLRQPSWRGLREDKSPAQAVLPPPPG
NT seq 993 nt   +upstreamnt  +downstreamnt
atggacgagattcccgaggcggtgcccccgatgctggccgtcgagggcgaactgcccacc
ggtccctgggcgtacgagtacaaatgggacggctaccgctgctgccttcgggccgcgccg
gacggaaccacccgcctcaccagccggaacggcaacgacctcacggccgcctacccggag
ctgaccggtctgccgccggccgcgttctgcggcctggccaccgtgctcgacggcgaggtg
gtggcgctcgaccccgccggccgccccgacttcgggctgctccagcgccgccggcggcaa
cgccccgccggcgggcgggcggctcccggcgtcacctacttcgcgttcgacctgctccgc
tcgggcggcaccgactacctgcgcgccccctacaccgaacgccggtcggcgctcctgcgc
ctggccgccgcggcggaaccggccgccgagggccggatcgcggtgccgccgcactacacc
gcggacgccatcgcccccctcgacctcctcggcgtcgcgcggcggcacggcctcgaagga
ctgatggccaagcgcctcgactcgccctacctgccgggtcacaggtcgaggtcgtgggtc
aaacggccgctcgtgcgcacccaggaggccgtgatcggcggctggcagcccggcgccgga
cggcgttccggcacggtcggctcgctgctgctcggcgcccacgacgcggccggggacctg
cgctacatcgggcacgtcggcagcggcttcaccggggcagcgctcgccgacctgctgcgg
cggctcaccccgctggcccgcgccaccagcccgttcgccggtcctgtgccccccgtccac
gccaggaccgcccgctggtgccggccgcgcctggtcggcgaggtcgccttccgggcctgg
acccgggacggcagactgcggcagccctcgtggcgcggcctgcgcgaggacaagtcgccg
gcgcaggccgtcctgccgccgcctcccggctga

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