Streptomyces marincola: CAG99_04410
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Entry
CAG99_04410 CDS
T08123
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smao
Streptomyces marincola
Brite
KEGG Orthology (KO) [BR:
smao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smao03016
]
CAG99_04410
Enzymes [BR:
smao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CAG99_04410
Transfer RNA biogenesis [BR:
smao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CAG99_04410
Prokaryotic type
CAG99_04410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ARQ68183
UniProt:
A0A1W7CTN3
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All DBs
Position
complement(1064679..1065572)
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AA seq
297 aa
AA seq
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MSHSAPDGLVVVDKPAGFTSHDVVAVLRGAARTRRVGHAGTLDPMATGVLVVGVGRATRL
LGHLALTEKEYAGTIRLGQTTVTDDAEGEITGSTGAHGIAGDALGAAVADLTGDIMQVPA
KVSAVKIDGRRSYHRVRAGEDVEIPARPVTVRSFTVHEVRELRAEDGTRVTDVDVGVVCS
SGTYIRALARDLGTALGTGGHLTALRRLRVGPYELAAAHPLQRLREELTVLPLGEAAAAA
FPRWNVDGQQAALLGNGARIATPPLPAGPVAVFGPDDRFIALIDAAGERSRSLAVFA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagccacagcgcacccgacgggctcgtcgtcgtcgacaagcccgccggattcacctcg
cacgacgtcgtcgccgtgctgcgcggcgccgcccgcacccggcgcgtcgggcacgccggg
accctggaccccatggccaccggcgtgctcgtcgtcggtgtcgggcgcgccacccggctg
ctcggccacctcgccctgacggagaaggagtacgcgggcaccatcaggctcggccagacg
acggtcaccgacgacgccgagggcgagatcaccgggagcaccggtgcccacggcatcgcc
ggggacgcgctcggggcggcggtcgccgacctgaccggggacatcatgcaggtgcccgcg
aaggtcagcgccgtcaagatcgacggccggcgctcctaccaccgggtgcgcgccggggag
gacgtggagatcccggcccgcccggtcaccgttcgctcgttcaccgtccacgaggtccgc
gagctgcgggcggaggacggcacccgggtgaccgatgtggacgtcggcgtcgtgtgctcg
tcgggcacctacatccgggcgctcgcgcgcgacctgggaaccgcgctcggcaccgggggg
cacctcacggcgctgcggcggctgcgcgtggggccctacgaactggccgcggcccacccg
ctccagcgcctgcgcgaggagctgacggtgctgccgctcggtgaggccgccgcggcggcg
ttcccgcgctggaacgtcgacgggcagcaggccgccctgctggggaacggtgccaggatc
gccaccccgccgcttccggcgggcccggtggcggtgttcgggcccgacgaccgtttcatc
gcgctgatcgacgccgcgggcgagcggtcgcggagcctcgcggtcttcgcctga
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