Streptomyces marincola: CAG99_09465
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Entry
CAG99_09465 CDS
T08123
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
smao
Streptomyces marincola
Pathway
smao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAG99_09465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smao03021
]
CAG99_09465
03400 DNA repair and recombination proteins [BR:
smao03400
]
CAG99_09465
Enzymes [BR:
smao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CAG99_09465
Transcription machinery [BR:
smao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAG99_09465
DNA repair and recombination proteins [BR:
smao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAG99_09465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
TarH
Motif
Other DBs
NCBI-ProteinID:
ARQ69061
UniProt:
A0A1W7CW86
LinkDB
All DBs
Position
complement(2195035..2198934)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDEERRTRDLPSLEAHISVERQQIEQRRDADLEARAKKQEAD
LAELEAEGAKADARRKVREGAEREMKQLRDRAQRELDRLEEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLETFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEEEREVKGE
GRSFASSAEGIMAFDAGELSLQAKIDIRFPVGSVPPRGWTPPEPAEGEPAWQPGDSFRLR
TTLGRALFNELLPEDYPFVDQSVGKKQLSGIVNDLAERYPKVVVAAALDNLKAAGYHWAT
RSGVTVAVSDIVVPEAKKDILANYEAQDEKVQKQYERGLITKDERTQELIAIWTKATGEV
AETMSDNFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLEIAGRG
ADGVLRKAENVESSVYARCLAEDIVVEGKVLAPAGTDLGDVLIDELVRHGVETVKTRSVL
TCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDIT
QGLPRVVELFEARTPKGVAPISESAGRVRIEETEKTKKVIVTPDDGSDETSYAVSKRSRL
LVGEGDHVTVGQPLTVGAANPHDVLRILGQRAVQVYLVGEVQKVYNSQGVAIHDKHIEII
VRQMLRRVTIIESGDAELLPGELVERSKFESENRRVVAEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGSGSGQAVPLEDYDYGPYQG
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcggatcggcctggccaccgctgacgacatc
cgtcagtggtcacacggcgaggtcaagaagccggagaccatcaactaccgcaccctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgccgcgagcggatgggccacatcgagctggccgcgccc
gtgacgcacatctggtacttcaagggcgttccctcgcgcctcggctacctgctcgacctg
gcgccgaaggacctggagaaggtcatctacttcgccgcgtacatgatcacgtacgtggac
gaggagcgccgcacgcgcgacctgccctcgcttgaggcgcacatctcggtggagcgccag
cagatcgagcagcgccgcgacgccgacctggaggccagggccaagaagcaggaggccgac
ctggccgagcttgaggccgagggcgccaaggccgacgcgcgccgcaaggtgcgcgagggc
gccgagcgcgagatgaagcagctgcgggaccgcgcccagcgcgagctcgaccgcctggaa
gaggtctggaaccgcttcaagaacctcaaggtgcaggacctggagggcgacgagctgctc
taccgcgagctgcgcgaccgcttcggcacctacttcgacggttcgatgggcgccgcggcg
ctccagaagcgcctggagaccttcgacctcgacgaggaggccgagcggctgcgggagatc
atccgcaccggcaagggccagaagaagaccagggccctgaagcgcctgaaggtcgtctcc
gcgttcctccagacctccaacagccccaagggcatggtgctcgactgcgttccggtcatc
ccgccggacctgcggccgatggtgcagctcgacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctgaagcgactgctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcggatgctccaggaggccgtggacgcg
ctgttcgacaacggccgccgcgggcgcccggtgaccggaccgggcaaccggccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccggcagaacctgctgggcaag
cgcgtcgactactcggcccgctccgtgatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgccgaaggcgatggcgctggaactgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgccagcgg
accgtggtgtacgacgtcctcgaagaggtcatcgccgagcacccggtcctgctcaaccgc
gcgccgacgctgcaccggctcggcatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagattcacccgctggtgtgcaccgcgttcaacgcggacttcgacggcgaccag
atggccgtgcacctgccgctgtccgccgaggcccaggccgaggcgcgcatcctgatgctg
tcctcgaacaacatcctgaagccggccgacggccgtccggtcaccatgcccacgcaggac
atggtgctcggcctgttcttcctcaccaccgacgaggaggagcgcgaggtcaagggcgag
ggccgctcgttcgcctcgtccgccgagggcatcatggcgttcgacgccggcgagctgtcg
ctccaggcgaagatcgacatccggttccccgtcgggtccgtgccgccccgcggctggacc
ccgccggagccggccgagggcgagcccgcgtggcagccgggcgacagcttccggctgcgc
acgacgctcggccgcgcgctgttcaacgagctgctgcccgaggactacccgttcgtcgac
cagtccgtcggcaagaagcagctgtccgggatcgtcaacgacctggcggagcgctacccc
aaggtcgtcgtcgccgcggcgctcgacaacctcaaggccgccggttaccactgggccacc
aggtccggggtcaccgtcgccgtgtccgacatcgtcgtgcccgaggcgaagaaggacatc
ctcgccaactacgaggcgcaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacgcaggagctgatcgcgatctggacgaaggcgaccggcgaggtc
gccgagaccatgagcgacaacttccccaagacgaaccccatcttcatgatggtcgactcg
ggggcccgcggaaacatgatgcagatgcgtcagatcgcgggcatgcgcggcctggtgtcc
aacgcgaagaacgagacgatcccgcggccgatcaaggcgtcgttccgcgagggcctgtcc
gtgcttgagtacttcatctccacgcacggcgcccgcaagggtctggcggacaccgcgctg
cggaccgccgactccgggtacctcacccggcgtctggtggacgtctcccaggacgtgatc
atccgcgaggaggactgcggcaccgaccgcggcctgaagctggagatcgcgggccggggc
gccgacggcgtcctccggaaggcggagaacgtcgagtccagcgtgtacgcgcgctgcctg
gccgaggacatcgtcgtcgagggcaaggtgctggccccggccggcaccgacctgggcgac
gtgctcatcgacgagctggtgcggcacggcgtggagacggtcaagacccgttccgtcctc
acctgcgagtccgcggtcggtacctgcgcgatgtgctacggccgttcgctggccaccggc
aagctcgtggacatcggcgaggcggtcggcatcatcgccgcccagtcgatcggtgagccc
ggcacccagctgaccatgcgtaccttccacaccggcggtgtcgcgggtgaggacatcacg
cagggtctgccgcgtgtggtcgagctgttcgaggcccggacccccaagggcgtcgcgccg
atctccgagtcggccggccgggtgcggatcgaggagaccgagaagaccaagaaggtcatc
gtcacccccgacgacggctcggacgagacctcctacgcggtctccaagcggtccaggctc
ctggtgggcgagggcgaccacgtcaccgtcggccagccgctgacggtcggcgcggccaac
ccgcacgacgtgctgcgcatcctcgggcagcgggccgtgcaggtctacctggtgggcgag
gtccagaaggtctacaactcgcagggcgtggcgatccacgacaagcacatcgagatcatc
gtccggcagatgctgcgccgggtgacgatcatcgagtccggcgacgcggagctgctgccg
ggcgagctggtcgagcggtcgaagttcgagtcggagaaccggcgcgtcgtggcggagggc
ggccacccggcctccggccgtccgcagctgatgggcatcaccaaggcgtcgctggccacc
gagtcgtggctgtcggcggcgtccttccaggagacgacccgggtgctgaccgacgcggcg
atcaacgccaagtcggactcgctgatcggtctcaaggagaacgtgatcatcggtaagctg
atcccggccggcacgggcctgtcccgttaccggaacatccgggtggagcccaccgaggag
gcgaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgcccttcggc
agcggctccgggcaggccgtcccgcttgaggactacgactacggcccctaccagggctaa
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integrated database retrieval system
