Streptomyces marincola: CAG99_19275
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Entry
CAG99_19275 CDS
T08123
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
smao
Streptomyces marincola
Pathway
smao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAG99_19275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smao03019
]
CAG99_19275
03009 Ribosome biogenesis [BR:
smao03009
]
CAG99_19275
Enzymes [BR:
smao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CAG99_19275
Messenger RNA biogenesis [BR:
smao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CAG99_19275
Ribosome biogenesis [BR:
smao03009
]
Prokaryotic type
rRNA processing factors
CAG99_19275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
HC2
Motif
Other DBs
NCBI-ProteinID:
ARQ70693
UniProt:
A0A1W7D0U0
LinkDB
All DBs
Position
4347041..4351141
Genome browser
AA seq
1366 aa
AA seq
DB search
MQEANESVGPDGAKRAVRTTTKNNASTTDHTDTTPSDTLPPRRRRAATRPAGPPAPAAEE
PAAGVQDAAGVQEIEAAPRKRRGVTRVASEPVPASEPAAEPAAVPEPAAQAQVAAPEPEA
AAPRRRRRATRAAAAPAQTPAAEPRAADEPAEEAAPARRRRRAASAPESVGEPESVPVAQ
VVAEGESEVAAPRRRRRATRAAAEPVAQPEAQAVPESVGEPESVPVAQVVAEGESEVAAP
RRRRRATRAAAEPVAQPEAQAVPESVGEVESVPVAQVVAEGESEVAAPRRRRRATRAAAE
PVAQPEAQAAPEPVKEPERAPARKEPASPPSVPVAPVFRAPVFQAPMFQTPQRAAEEAVR
SAALGAEADEADDVDEADELMEPEGLTASGEAVAEDERNLDEAVESDEAADEDEAQADRP
ARRRRRGGRRRRRGETAERAAEAAAAASAETGADDAEGAGAEGADAGVEADAEPAGEAED
AEPDADAEDEAESGGSSRRRRRRRRRSGESGEAADGDDPERTVVKVREPRRKRDEAAGSD
GVQSIKGSTRLEAKKQRRREGREQGRRRAPIITEAEFLARRESVERVMIVRQSGERTQIA
VLEDDVLVEHFVNKEQSASYVGNVYLGKVQNVLPSMEAAFVDIGKGRNAVLYAGEVNFEA
LGLGNGPRRIETALKSGQPVLVQVTKDPIGHKGARLTSQISLPGRYLVYVPEGSMTGISR
KLPDTERARLKQVLKKIVPDDAGVIVRTAAEGASEEELTRDVERLQAQWEEIKKKSKKGN
APALLYGEPDMTVRVVRDIFNEDFSKVIVSGDEAWETIHGYVAHVAPDLKERLQRWTSEV
DVFATYRIDEQLMKALDRKVWLPSGGSLVIDRTEAMVVIDVNTGRFTGQGGNLEETVTRN
NLEAAEEIVRQLRLRDLGGIIVIDFIDMVLESNRDLVLRRLLECLGRDRTKHQVAEVTSL
GLVQMTRKRVGQGLLESFSEPCVHCNGRGVIVHADHAHAPGGGGGKKSRKRGRAAAEEPQ
PVAEAPEAETGVEEQPAGPAPVDGEPVTPIVPPETAREDEPIERVERVVPAGEAEPAAPA
EPAAEQAPAPVEPAAEQAQGPRRRRRVTRKVSAPAGPPKAAADEAVTVVAPAAAEQPEPE
PEPAPAAAQEEPAPPRRRGSRKASAPAGAPKAADDSSVVVVAANAPAEPVAEPEPSSPAP
EREAVAAPPRRRVVRRASAPAGSPEGATEAVVTVVTADAAKKATARKTAKKATAKKAAAA
EAAEAPAVEEAPVETPAVEEAPAETPAAEEAPAKKTAARKTATKKATAKKATTKKTAAKK
TTAKKATTKKAATKTAAKKTAKKTTAKKTAKTASAAEQPSSVSAGE
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggccaacgaatccgtggggcccgacggtgccaagcgcgccgtgcggaccacc
acgaagaacaacgcttcgacgaccgatcacaccgacacgacaccgagtgacaccttgccg
ccgcgccgtcggcgcgccgcgactcggccggcgggcccgcccgctccggcggcggaggaa
cccgcggcaggcgttcaggacgcggcaggcgttcaggagatcgaggccgcgcccaggaaa
cgccgtggtgtgacgcgcgtcgcgtccgaacccgttccggcgtccgagccggcggccgag
cccgcggccgtgccggagcccgccgcccaggcgcaggtcgcggccccggagccggaggcc
gccgcgccccggcggcggcgccgcgcgacccgtgcggctgccgcgccggcccagacgccg
gccgcggagccgcgggcggccgacgagccggcggaggaggcggcgccggcacggcggcgg
cgccgtgccgcgtccgcgcccgagtcggtgggggagccggagtcggttccggtggcgcag
gtggttgcggagggggagtcggaggtggcggcgccgaggcggcgtcgtcgtgcgacgcgt
gcggcggccgagccggtggcgcagcctgaggcgcaggctgtgccggagtcggtgggggag
ccggagtcggttccggtggcgcaggtggttgcggagggggagtcggaggtggcggcgccg
aggcggcgtcgtcgtgcgacgcgtgcggcggccgagccggtggcgcagcctgaggcgcag
gctgtgccggagtcggtgggggaggtggagtcggttccggtggcgcaggtggttgcggag
ggggagtcggaggtggcggcgccgaggcggcgtcgtcgtgcgacgcgtgcggcggccgag
cccgtggcccagcccgaggcgcaggccgcgccggaaccggtgaaggagccggagcgcgcg
ccggcgcggaaggagccggcgtcgccgccctccgttcccgtggctccggtgttccgtgcg
ccggtgttccaggcccccatgttccagacgccccagcgggccgccgaggaggcggtgcgc
agcgcggcactcggcgccgaggccgatgaggccgatgacgtcgacgaggcggacgagctc
atggagccggagggcctcacggcctcgggcgaggccgtggcggaggacgagcggaacctc
gatgaggccgtcgagtccgacgaggccgcggacgaggacgaggcgcaggccgaccggccc
gcccgcaggcggcgccgcggtggccgcaggcgccggcgcggcgagaccgcggagcgcgcg
gccgaggccgcggctgccgcctcggccgagaccggtgcggacgacgcggaaggcgccggt
gccgaaggcgccgacgcgggcgtggaggccgacgcggagcccgccggcgaggcggaggac
gcggagccggacgcggacgccgaggacgaggcggagagcggcggctcctcgcgccgcagg
cggcggcgcaggcggcgcagcggcgagtccggcgaggcggcggacggcgacgatccggag
cgcacggtcgtgaaggtccgcgagccgcgccgcaagcgcgacgaggcggccgggtccgac
ggcgtgcagtccatcaagggctccacgcgtcttgaggcgaagaagcagcgccggcgcgag
ggccgtgagcagggccgccgccgcgcgccgatcatcaccgaggcggagttcctcgcgcgc
cgggagtccgtcgagcgggtcatgatcgtccggcagagcggcgagcgcacgcagatcgcg
gttcttgaggacgacgtgctcgtcgagcacttcgtgaacaaggagcagtcggcgtcctac
gtcggcaacgtctacctcggcaaggtgcagaacgtcctgccgtcgatggaggcggcgttc
gtcgacatcggcaagggccgcaacgccgtgctgtacgcgggcgaggtcaacttcgaggcg
ctcgggctcggcaacgggccgcgccgcatcgagaccgccctgaagtcgggccagccggtg
ctcgtccaggtcaccaaggaccccatcggccacaagggcgcgcgcctgaccagccagatc
tcgctcccgggccgctacctggtgtacgtgcccgagggctcgatgaccgggatcagccgg
aagctgcccgacaccgagcgcgcgcggctgaagcaggtgctcaagaagatcgttcccgat
gacgcgggcgtcatcgtgcggacggccgccgagggcgcgagcgaggaggagctgacgcgg
gacgtcgaacggctccaggcgcagtgggaggagatcaagaagaagtccaagaagggcaac
gcgcccgcgctgctgtacggcgagccggacatgaccgtccgcgtggtgcgcgacatcttc
aacgaggacttctcgaaggtcatcgtcagcggcgacgaggcgtgggagaccatccacggg
tacgtggcgcacgtggcgcccgacctcaaggagcggctccagcgctggacgtccgaggtc
gacgtgttcgcgacgtaccgcatcgacgagcagttgatgaaggccctggaccgcaaggtg
tggctgccgagcggcggttccctggtcatcgacaggaccgaggccatggtcgtcatcgac
gtgaacaccggccggttcacgggccagggcggcaacctggaggagacggtcaccaggaac
aacctggaggcggccgaggagatcgtgcgccagctgcggctgcgcgacctcggcggcatc
atcgtgatcgacttcatcgacatggtgctggagtccaaccgcgacctggtactgcggcgg
ctgctcgaatgcctcggcagggaccggacgaagcaccaggtggcggaggtcacctcgctc
ggcctcgtgcagatgacgcggaagcgggtcgggcaggggctgcttgagtcgttctccgag
ccgtgtgtccactgcaacggccggggtgtcatcgtgcacgccgaccacgcgcacgcgccg
ggcggcgggggcggcaagaagagccgcaagcgcggccgggcggcggccgaggagccgcag
ccggtggccgaggccccggaggcggagaccggcgtcgaggagcagccggccgggcccgcg
ccggtggacggcgagccggtgacgccgatcgtgccgccggagacggcgcgggaggacgag
ccgatcgaacgggtcgagcgtgtcgtgccggccggggaggcggagcccgcggctccggcc
gagcccgcggccgagcaggcgcccgcgccggtggagcccgcggccgagcaggcgcagggg
ccgcgcaggcggcggcgcgtcacccgcaaggtgagcgcgcccgccgggccgccgaaggcg
gcggccgatgaggccgtgacggtcgtcgctcccgcggcggccgagcagccggagcccgag
cccgagccggcgcccgccgcggcgcaggaggagcccgcgccgccgcggcggcgcggcagc
cggaaggcgtccgccccggcgggcgcgccgaaggcggccgacgactcctcggtggtcgtc
gtcgcggcgaacgcgcccgcggagcccgtggcggaaccggagccgtcgtcccccgcgcct
gagcgggaggccgtcgcggcgccgccgcgacgccgggtggtcaggcgggcctccgcgccg
gcgggctcgcccgaaggggcgaccgaggccgtggtgaccgtggtgaccgcggacgcggcc
aagaaggccacggcacggaagacggcgaagaaggccacggccaagaaggccgccgcggcc
gaggcagccgaggcgcccgcggtcgaggaggccccggtcgagaccccggcggtcgaggag
gccccggccgagaccccggcggccgaggaggccccggcgaagaagacggccgcgcggaag
acggccacgaagaaggccacggccaagaaggccacgaccaagaagacggcggcgaagaag
accaccgccaagaaggccacgaccaagaaggccgccaccaagacggcggccaagaagacg
gcgaagaagaccacggcgaagaagacggccaagaccgcctccgccgcggagcagccgtcc
tcggtctcggccggcgagtga
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