Streptomyces marincola: CAG99_23460
Help
Entry
CAG99_23460 CDS
T08123
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smao
Streptomyces marincola
Pathway
smao00040
Pentose and glucuronate interconversions
smao01100
Metabolic pathways
smao02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CAG99_23460
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CAG99_23460
Enzymes [BR:
smao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CAG99_23460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ARQ71393
UniProt:
A0A1W7D2T0
LinkDB
All DBs
Position
5369964..5371301
Genome browser
AA seq
445 aa
AA seq
DB search
MNRTHRRRRHVRLTALTGCAVLAFGLAAVPQASAAHGRGGDQARAVLPAGDGWGSAEGSV
TGGAAAGRGDVVTVSTREELATALAEGGDTPKIIRVDGTIDANTDAAGRPLTCEDYAVDG
YTLEGYLAAYDPEVWGRDAEPSGPLEDARVASAARQKERVVLPVGSNTTIIGIGRDARLL
GATLDVRRAENVIIRNLTFEDSFDCFPQWDPTDGDLGAWNSEYDSLVLYGSRHVWVDHNT
FTDGRRPDAEQPEYFGRLFQQHDGQLDIVRGSDLVTVSWNVFTEHDKTILLGNSDGAAAD
DRGKLRTTFHHNLFHNVNERAPRVRYGQVDVYNNHFRQDAGARYGYSWGIGIESALVAEY
NAFTLPRDVAPAQVLHRWTAGTSVTERGNWVNHRPVDLLGAYQRANPDAPLGDDAGWRPE
LRDRVDHPLVVPLLVDRWAGAGRLR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcacacacagaagacgcagacatgtccgactgaccgctctcaccggctgcgcc
gtgctcgcgttcggcctcgccgccgtgccgcaggcgtcggccgcgcacgggcggggcggc
gaccaggcgcgcgcggtgctgcctgccggcgacggctggggctcggcggagggctcggtc
accgggggagcggcggcggggcgcggcgacgtcgtgaccgtgtccacccgcgaggagctg
gccaccgcgctcgccgagggcggcgacaccccgaagatcatccgcgtcgacggcacgatc
gacgccaacaccgacgcggccgggcgcccgttgacgtgcgaggactacgccgtcgacggc
tacacgctggagggctacctggcggcctacgaccccgaggtgtggggccgggacgccgag
ccctcggggccgcttgaggacgcccgcgtcgcctcggcggcgcggcagaaggaacgcgtc
gtcctgcccgtcggctcgaacaccacgatcatcggcatcgggcgggacgcgcggctgctg
ggcgccacgctggacgtgcggcgcgcggagaacgtcatcatccgcaacctgacgttcgag
gacagcttcgactgcttcccgcagtgggacccgacggacggcgatctcggcgcgtggaac
tcggagtacgacagcctcgtgctgtacggctcccggcacgtgtgggtggaccacaacacg
ttcacggacggccgcaggcccgacgcggagcagccggagtacttcggccggctgttccag
cagcacgacgggcagctcgacatcgtgcgcggcagcgacctggtcacggtcagctggaac
gtcttcaccgagcacgacaagacgatcctgctgggcaacagcgacggtgccgcggcggac
gaccggggcaagctgcgcacgacgttccaccacaacctgttccacaacgtcaacgagcgg
gcgccgcgcgtgcggtacggccaggtcgacgtctacaacaaccacttccggcaggacgcg
ggagccaggtacgggtacagctggggcatcggcatcgagtcggcgctggtggccgagtac
aacgcgttcacgctgccgagggatgtcgcgccggcgcaggtgctgcaccggtggacggcc
ggcacgtcggtgaccgagcggggcaactgggtgaaccacaggcccgtggacctgctgggc
gcctaccagcgggccaaccccgacgcgccgctcggtgacgacgccggctggcggcccgag
ctgcgcgaccgggtggaccacccgctggtggtgccgctgctcgtggaccgctgggccggg
gccggccgcctgcgctga
DBGET
integrated database retrieval system