Streptomyces marincola: CAG99_24990
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Entry
CAG99_24990 CDS
T08123
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
smao
Streptomyces marincola
Brite
KEGG Orthology (KO) [BR:
smao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smao03019
]
CAG99_24990
Enzymes [BR:
smao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CAG99_24990
Messenger RNA biogenesis [BR:
smao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CAG99_24990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ARQ71652
UniProt:
A0A1W7D3Q1
LinkDB
All DBs
Position
5683028..5685835
Genome browser
AA seq
935 aa
AA seq
DB search
MTDHMSPAERYSAARRRAAEQATALASFRELYDFGLDAFQIEACQALEAGKGVLVAAPTG
SGKTIVGEFAVHLALAQGRKCFYTTPIKALSNQKYTDLVKRYGADRVGLLTGDNSVNSDA
PVVVMTTEVLRNMLYAGSQALRGLGHVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSL
SATVSNAEEFGDWLDTVRGDTEVIVSEHRPVPLWQHVLAGRRMYDLFEESEDKREVNPDL
VRMARMENSRPWTARERYRNGRDRKRAAERERERRQRARTYTPSRVEVIDRLDAEGLLPA
ITFIFSRAGCEAAVQQCLHAGLRLNDAAARGRVREIVERRTAAIPDEDLHVLGYFEWLEG
LERGIAAHHAGMLPTFKEIVEELFVQGLVKAVFATETLALGINMPARSVVLEKLVKWNGE
QHADITPGEYTQLTGRAGRRGIDIEGHAVVLWQRGMDPAALAGLAGTRTYPLRSSFRPSY
NMAVNLVAQFGRQRSRELLETSFAQFQADRSVVGISRQVQRNENGLRGYREAMTCHLGDF
TEYARLRRRLKDRETELAKQGVAQRRAAAHTSLEQLRPGDIIHVPTGKFAGLALVLDPGV
PGGGGGRRGFEHHEGPRPLVLTEQRQVKRLASIDFPVPVEPLERMRIPRSFNPRSPQSRR
DLASALRTKAGHVVPRRHRKERSAAADDHEIARLRAEIRAHPCHGCDEREDHARWAERYE
RLRRDTRQLERRIEGRTNTIARTFDDVAALLTELDYLRGDEVTPDGRRLARLYGELDLLA
GECLRDGVWEGLGPAELAACASALVYEARSADDAPAPEVPGGRTRQALSEMIGIWGRLDA
LEERHHIGQATGVGQREPDLGFAWPAYRWAQGSGLDEVLRDADMPAGDFVRWCKQVIDVL
GQLAAAAPEGGTVPRTARKAVDKMLRGVVAYSSVG
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccacatgtcccctgctgagcgctactccgccgccaggcggcgcgccgccgag
caggccaccgccctcgcgtcgttccgggagctgtacgacttcggtctcgacgcgttccag
atcgaggcgtgccaggcccttgaggccggcaagggggtgctcgtcgcggcccccacagga
tcgggcaagacgatcgtgggggagttcgccgtccacctggccctggcgcagggccgcaaa
tgcttctacaccacgccgatcaaggccctgtcgaaccagaagtacaccgatctggtcaag
cggtacggcgccgaccgggtgggtctgctcaccggtgacaacagcgtcaactccgacgcg
cccgtggtcgtgatgaccaccgaggtcctgcgcaacatgctgtacgcgggctcgcaggcg
ctgcgcggcctcgggcacgtcgtgatggacgaggtgcactacctgtcggaccgcttccgc
ggcgcggtctgggaggaggtgatcatccacctgcccgagtcggtgacgctggtgtcgctg
tccgcgaccgtctccaacgccgaggagttcggcgactggcttgacacggtgcgcggcgac
accgaggtcatcgtctccgagcaccggcccgtgccgctgtggcagcacgtgctcgcgggc
cggcggatgtacgacctgttcgaggagtcggaggacaagcgcgaggtcaatcccgacctg
gtgcgcatggcgcggatggagaacagccgtccgtggaccgcgcgcgagcgctaccgcaac
gggcgcgaccgcaagcgggccgccgagcgggagcgggagcgcaggcagcgcgcgcgcacg
tacacgccgagccgggtcgaggtcatcgaccggctcgacgcggagggcctgctgcccgcc
atcacgttcatcttcagccgggccggctgcgaggccgccgtccagcagtgcctgcacgcc
gggctgcggctgaacgacgcggcggcccgcgggcgcgtgcgcgagatcgtggagcggcgc
acggccgcgatccccgacgaggacctgcacgtcctgggctacttcgagtggctcgaaggg
ctggagcggggcatcgcggcgcaccacgcggggatgctgccgacgttcaaggagatcgtc
gaggagctgttcgtccagggcctggtgaaggcggtgttcgccacggagacgctggcgctc
ggcatcaacatgccggcgcgttccgtggtgctggagaagctggtcaagtggaacggcgag
cagcacgcggacatcacgccgggcgagtacacccagctcaccgggcgggccggccgccgc
ggcatcgacatcgagggccacgcggtcgtgctgtggcagcgcggcatggacccggcggcg
ctcgcggggctggcggggaccaggacctacccgctgcgctcctccttccggccctcctac
aacatggccgtgaacctggtcgcgcagttcggcaggcagcgctcgcgcgagctgcttgag
acctcgttcgcccagttccaggcggaccgctccgtggtgggcatctcccggcaggtgcag
cgcaacgagaacgggctgcgcggttaccgcgaggcgatgacctgccacctgggcgacttc
accgagtacgcgcggctgcggcgccggctgaaggaccgcgagaccgagctggcgaagcag
ggcgtggcgcagcgcagggccgcggcgcacacctcgctcgaacagctgcgcccgggggac
atcatccacgtcccgaccgggaagttcgccggcctcgcgctcgtgctcgacccgggcgtg
cccggcgggggcggcgggcggcgcggcttcgagcaccacgagggcccgcgtccgctggtg
ctgacggagcagcggcaggtgaagcggctggcctcgatcgacttccccgtgccggtggag
ccgctggagcgcatgcgcattcccaggtcgttcaatccgcgcagcccgcagtcgcggcgc
gacctggcgtcggcgttgcgcaccaaggcggggcacgtggtgccgaggcggcaccgcaag
gagcggtcggccgcggccgacgaccacgagatcgcgcggctgcgcgcggagatcagggcc
cacccctgccacggctgcgacgagcgggaggaccacgccaggtgggccgaacgctacgag
cggctgcggcgggacaccaggcagcttgagcggcgcatcgagggcaggacgaacacgatc
gcccgtaccttcgacgacgtggcggcgctgctgaccgagctcgactacctgcggggcgac
gaggtgacgccggacggccggcggctggcgcggctgtacggcgagctcgacctgctggcc
ggcgagtgcctgcgcgacggcgtgtgggaggggctcggcccggcggagctcgcggcctgc
gcctccgccctggtctacgaggccaggtcggcggacgacgcgcccgcgcccgaggtgccg
ggcgggcgtacgcgccaggcgctgagcgagatgatcggcatctgggggcggctcgacgcg
ctggaggagcggcaccacatcggccaggcgaccggggtcgggcagcgcgagcccgacctg
gggttcgcgtggccggcgtaccggtgggcgcaggggagcggcctggacgaggtgctgcgg
gacgcggacatgccggccggtgacttcgtgcgctggtgcaagcaggtcatcgacgtgctc
ggccagctcgccgccgcggcgcccgagggcggcacggtgccgcgcaccgcgcggaaggcc
gtggacaagatgctgcgcggggtggtggcctacagctcggtcggctga
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