Streptomyces marincola: CAG99_25090
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Entry
CAG99_25090 CDS
T08123
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
smao
Streptomyces marincola
Pathway
smao03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CAG99_25090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smao03400
]
CAG99_25090
DNA repair and recombination proteins [BR:
smao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CAG99_25090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
PNM8A
Motif
Other DBs
NCBI-ProteinID:
ARQ71670
UniProt:
A0A1W7D508
LinkDB
All DBs
Position
5705187..5706221
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AA seq
344 aa
AA seq
DB search
MRTIWKGSISFGLVTIPIKVVGATENHSVSFRQIHTSDEGRIRYRKVCELDGEEVPSDEI
GKGYETGDGSLVQLTDDDLAALPLPTARTVEILGFVPVADIDPYQLDRSYYLTADAGAAK
PYVLLREALRRAGRGAIAKLAMRGRETLALVRALDDEDVLGMHTLLWPDEIRPAAGLAPD
EQVTVRDAELDLADTLMDTLGTVDMAELRDEYREAVEALVGAKLAGAEPDLGAFAAPEGG
KVVDLMAALEDSVRSAREARGEDTEEREATVTPIKKSAKKSAKRTEKRTGAKKTAKKTAK
KAPAKKAARSEQAERQGGEGEGADRNQGRGAPAKKKAAGRKRAS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacgatatggaaagggtccatttcatttggtttggtgacgattccgatcaaggtg
gtcggcgccacggagaaccactccgtgtccttccgccagatccacacctccgacgagggc
cgcatccggtaccgcaaggtgtgcgagctggacggcgaggaggtgccgagcgacgagatc
ggcaagggctacgaaacgggggacggctccctcgtccagctcaccgacgacgacctggcc
gcgctgcccctgcccacggccaggaccgtggaaatcctcggcttcgtcccggtcgccgac
atcgacccctaccagctcgaccgttcgtactacctgacggccgacgcgggcgcggccaaa
ccctacgtgctgctgcgggaggcgctgcgccgcgccggccggggcgccatcgccaagctc
gccatgcgcggccgggaaaccctcgccctggtccgggccctggacgacgaggacgtgctc
ggcatgcacaccctgctgtggccggacgagatcaggccggccgccgggctggcccccgac
gagcaggtgaccgtgcgcgacgcggaactcgacctggccgacaccctgatggacaccctg
ggcaccgtcgacatggccgaactgcgcgacgagtaccgcgaggcggtggaggccctggtc
ggcgcgaagctcgcgggcgccgagcccgacctcggcgcgttcgccgcgcccgagggcggc
aaggtcgtcgacctgatggccgcgcttgaggacagcgtccgcagcgcccgcgaggcgcgc
ggagaggacacggaggagcgcgaggccaccgtcaccccgatcaagaagtccgcgaagaag
agcgcgaagcggaccgagaagcggaccggcgcgaagaagacggcgaagaagacggcgaag
aaggcgcccgccaagaaggcggcgcggtccgagcaggcggaacggcagggcggcgagggc
gaaggggcggacaggaaccagggacgcggcgcgcccgccaagaagaaggcggcgggccgc
aaacgcgcctcctga
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