Serratia marcescens SM39: SM39_0356
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Entry
SM39_0356 CDS
T03592
Symbol
sbcC
Name
(GenBank) exonuclease, dsDNA, ATP-dependent
KO
K03546
DNA repair protein SbcC/Rad50
Organism
smar
Serratia marcescens SM39
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smar03400
]
SM39_0356 (sbcC)
DNA repair and recombination proteins [BR:
smar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SM39_0356 (sbcC)
Archaeal homologous recombinant proteins
SM39_0356 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
AAA_21
cobW
AAA_15
TsaE
GTP_EFTU
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAO32421
LinkDB
All DBs
Position
complement(372606..375857)
Genome browser
AA seq
1083 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELARRED
GKILADKVRDKLEITAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGRLSEQVFESHKQAKTDLDGLHQRASGIELLNDEQRHSLTEQLTALSAQESALGKQTQQ
QQQALSWLQQWQRLQQQQNEGQRRLETAQREQTEAAPQLQRLALSEPAEKLRPLRGERDR
CRAELQTIQQQAAQLTQQQEQHSAQLAPLQQAVEKARLAQQAHAEHMRQQQQLIDDQVAP
LDHQIAQLQSTQAERRQAGDAAAQQCAKQQTTLEQLTAERSQLTAQAAQHQQQLNALTEA
LAVQQQQQQALAAQTPLAPLRQRLSALADLRPTRQQLFTLASLSQQVVKRLEQQRQELNI
GQNELTQLEPQLELIRQQFKQQKAHQADVEKTYALEQRIVGLEAERARLQPGAPCPLCGS
CEHPAVEQYQEVKLSETAQRLEQMKVQTEALQKQGVELRARYDNLQQQLQRQQQAIAQDE
QQLAAQQQQWQQLSAPLAFDFTLAEGERLSAWLSGCDDEERRGQHALQQHEQAAQAVQQA
KDALAALQTQQQQAQQRLALLEERFTLLQKTHADSLQQQQDLQQRWQEGEKTLAERRAQR
LALFGEQQVAEVREQLRAKQTACEQASLQAAEQWQKAQELRERLAGQQAGLQQQHTQMQE
RLQQAQQLWQQALADSEFADETAFAAALLDDALRRELQQRKEQLQQRQVEAAALLTQATQ
TLEQHRQSRPEGVGEANADLDALTQSLAELAQQLKTLQLRQGELRNQLESDAARRLNQQA
LFEQIARSQQDYDDWSYLNQLIGSKEGDKFRRFAQGLTLDHLVYLANQQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGVSRLEAHF
RLE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcagcctgcggttaaaaaacctcaactcgctgcagggcgagtggaaaatt
gacttcaccgccgagccgttcgccagcaacggcctgttcgccattaccggcccgaccggc
gcgggcaaaaccaccctgctggacgccatctgcctggcgctgtaccaccagacgccgcgt
ctcaacgtcacgccgagccagaatgaactgatgacccgccacaccgccgaatcgctggct
gaggtcgaattcgaggtcaagggcgtcggctatcgcgccttctggagccagcgccgcgcc
aaaaacgcgccggacggcaatctgcaggcaccgaaggtggaactggcgcgccgcgaggac
ggcaagatcctggcggacaaggtgcgcgacaagctggagatcaccgccgccatcaccggg
ctggacttcggccgcttcaccaaatcgatgatgctgtctcaggggcagttcgccgcgttc
ctcaacgccgacgccaacgatcgcgctgaactgttggaagagctgaccggcaccgaaatc
tacgggcggttgtccgaacaggtgttcgaatcgcacaagcaggccaaaaccgacctggat
gggttgcaccagcgcgccagcggcatcgagctgctgaacgatgaacagcgccactccctg
actgaacagctgacggcgctgagcgcgcaggaaagcgccctcggtaagcaaactcagcaa
cagcaacaggcgctgagctggctgcagcaatggcaacgcctccagcaacagcaaaacgag
ggtcaacggcggctggaaaccgcccagcgcgagcagacggaggccgccccgcagctacag
cggctggcgctcagcgaaccggccgagaaattgcggccgctgcgcggtgaacgcgatcgc
tgccgcgccgagctgcagacgatacaacagcaggcagcccagctgacgcagcaacaggaa
cagcactcggcgcagctggcgccactgcagcaggcggtggaaaaggcccgtctggcgcag
caagcccatgccgagcatatgcggcagcagcaacagctgatcgatgaccaggtcgccccg
ctcgaccaccaaatagcccaactgcagtcgacgcaggccgagcggcgacaggccggcgat
gccgccgcgcagcagtgtgccaaacagcaaaccacgctggagcagctcaccgccgagcgc
agccagctgacggcgcaggccgcacagcatcagcagcagttgaacgcgctgaccgaagcg
ctggccgttcagcagcaacagcagcaggcgctggcggcgcaaacgccgctggccccgctg
cgccagcgcctgagcgctctggcggatctgcgcccgacgcgccagcagttatttacgctc
gcctctttatcgcaacaagttgttaaacggctggaacagcagcggcaagagctaaacatc
ggtcaaaatgaactgacccagttggagccacagttagagctcatccgtcagcaatttaag
cagcagaaagcccaccaggccgatgttgaaaaaacctatgcgctggaacaacggatcgtg
ggtctggaagccgagcgcgcccgtttgcaacccggcgccccctgcccgctgtgcggctca
tgcgagcacccggcggtagaacaataccaagaggtaaaactgtcagaaactgcgcaacgt
ctggagcaaatgaaagtccagaccgaagcattgcaaaaacaaggcgtcgagctgcgagcc
cgttacgacaacctgcaacagcaattgcaacgccaacagcaggctatcgcgcaggatgag
cagcagctggctgcccaacagcagcagtggcagcagctcagcgcgccgctggcattcgac
tttacgttggccgagggcgagcggctcagcgcctggctaagcggctgcgacgatgaagag
cggcgcgggcaacacgcgctgcagcagcatgaacaggcggcgcaggcggtacagcaggcg
aaagacgcgctcgccgctctgcaaacgcagcagcagcaggcgcagcaacggctggcgctg
ctcgaagagcgctttacgctactgcagaaaacccatgccgacagcctgcaacagcagcaa
gacctgcaacaacgctggcaagaaggcgagaagaccctcgccgaacggcgcgcgcagcgg
ctggcgctgttcggcgaacagcaggtcgccgaggtgcgcgaacagctgcgcgccaaacaa
accgcctgtgagcaggccagcttgcaggccgccgagcagtggcaaaaagcgcaggaactg
cgcgagcgcctggccggccagcaggccggattgcaacaacagcacacccaaatgcaggaa
cggctgcagcaggcgcagcagctgtggcagcaggcgctggccgacagcgaattcgccgat
gaaaccgccttcgccgctgcgctgctggacgacgccctgcgccgcgaattgcagcagcgc
aaagagcaactgcaacagcggcaggtggaggccgccgccctgctgacgcaggcgacgcaa
acgctggagcagcatcggcaaagccgcccagaaggggtgggtgaagccaacgcggatctc
gacgcactcacccaatcgctggccgagctggcacagcagttgaaaacgttgcagctgcgc
cagggtgaactgcgcaaccagttggaaagcgacgccgcccgccgcctcaatcaacaggca
ctgttcgagcaaatcgcccgcagccagcaagactacgacgactggagctacctcaaccag
ctgatcggctcgaaagaaggcgacaagttccgccgcttcgctcaggggctgacgctcgat
catctggtttatctggccaaccagcaactcggccggctgcacgggcgctacctgctgcag
cgcaaaaccagcgacgcgctggagctgcaggtggtggacacctggcaggccgacgcgctg
cgcgatacccgcaccctgtccggcggcgagagcttcctggtcagcctggcgctggcgctg
gcgttgtccgatctggtcagccacaaaaccagcatcgactcgctgttcctcgacgaaggc
ttcggcacgctggacgccgaaaccctcgataccgcgctggacgcgctggacagcctgaac
gcctccggcaaaaccattggcgtgatcagccacgtcgaggcgatgaaagagcgtattccg
gtgcagatcaaggtgaaaaaggtcaacggactcggcgtcagccggctggaggcgcacttt
aggctggaatga
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