Serratia marcescens SM39: SM39_0405
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Entry
SM39_0405 CDS
T03592
Symbol
hupB
Name
(GenBank) HU, DNA-binding transcriptional regulator, beta subunit
KO
K03530
DNA-binding protein HU-beta
Organism
smar
Serratia marcescens SM39
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smar03032
]
SM39_0405 (hupB)
03036 Chromosome and associated proteins [BR:
smar03036
]
SM39_0405 (hupB)
03400 DNA repair and recombination proteins [BR:
smar03400
]
SM39_0405 (hupB)
DNA replication proteins [BR:
smar03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SM39_0405 (hupB)
Chromosome and associated proteins [BR:
smar03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SM39_0405 (hupB)
DNA repair and recombination proteins [BR:
smar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SM39_0405 (hupB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BAO32469
LinkDB
All DBs
Position
429521..429793
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDAVIASVTDSLKAGDDVALVGFGSFTVRERSARTG
RNPQTGKEIKIAAAKVPAFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacaactgatcgacaagattgccgcaggtgctgatatttccaaagcggca
gcgggacgtgctttagacgcagtaatcgcttccgttaccgactctctgaaagcaggggat
gacgtggctctggtaggtttcggttccttcaccgtgcgtgaacgttcggctcgtaccggc
cgcaacccgcagaccggtaaagagatcaaaatcgcggcagccaaagtaccggccttccgt
gcagggaaagcgctgaaagacgctgtaaactga
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