Serratia marcescens SM39: SM39_0456
Help
Entry
SM39_0456 CDS
T03592
Symbol
dnaX
Name
(GenBank) DNA polymerase III/DNA elongation factor III, tau and gamma subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
smar
Serratia marcescens SM39
Pathway
smar03030
DNA replication
smar03430
Mismatch repair
smar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SM39_0456 (dnaX)
03430 Mismatch repair
SM39_0456 (dnaX)
03440 Homologous recombination
SM39_0456 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smar03032
]
SM39_0456 (dnaX)
03400 DNA repair and recombination proteins [BR:
smar03400
]
SM39_0456 (dnaX)
Enzymes [BR:
smar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SM39_0456 (dnaX)
DNA replication proteins [BR:
smar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SM39_0456 (dnaX)
DNA repair and recombination proteins [BR:
smar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SM39_0456 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_4
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
AAA_14
AAA_16
ResIII
AAA_2
AAA_assoc_2
TsaE
nSTAND3
EAL
AAA_7
AAA_24
Mg_chelatase
SKI
PIF1
Motif
Other DBs
NCBI-ProteinID:
BAO32520
UniProt:
A0AAT9DSS4
LinkDB
All DBs
Position
474718..476676
Genome browser
AA seq
652 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTTIARLLAK
GLNCETGITATPCGQCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
DQIRQQLETVLTAEQITSDARALQLLARAADGSMRDALSLTDQAIAMGQGQVTAATVSQM
LGTLDDEQPLAILEALVSADGEKVMAQVAQAASRGVDWENLLVETLALLHRIAMVQLLPS
MLDNQYAAVEQRLRELARTLPPADVQLYYQTLLVGRKELAYAPDRRMGVEMTLLRALAFH
PKAVIPEPVALVQTAPAPMAQPQAAASQQPPQFQDAPPPLGQPAAPPRQSSTPLPDATAQ
LLKARSQLQRQQGASTPKKNEPAAPGIARPANSALGRLASVTERSQQRLAEKKVPEKPAK
PEAYRWRAQTEPEAAPEPLATPKALRTALEHEKTPELAAKLVVESLERDAWAAEIDKLKI
PKLVQQLALNAFKQQPEAGKICLHLRSSQRHLNSPSAQKTLAEALGELYGSPIELTVIED
DNPAERTPLEWRQAIYEEKLAQARQSIVADTHIQTLCRFFDADLDEESIRPL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctcgcccgtaagtggcgccctcaaacgttcgcagacgtggtcggc
caggaacatgtcctgaccgcgctggccaacggcctctcgctggggcggatccatcacgcc
tatctgttctcgggcacgcgcggcgtggggaaaaccaccatcgcgcgcctgctggccaaa
ggcctgaactgtgaaaccggcatcaccgccacgccgtgcggccaatgcgacaactgccgc
gagatcgagcaggggcgcttcgtcgatctgatcgagatcgacgccgcttcccgaaccaag
gtggaagatacccgcgatctgctggacaacgttcagtacgcgccggcgcgcggccgcttc
aaggtctacctgatcgatgaagtgcacatgctctcgcgccacagcttcaacgcgttgctc
aagacgctggaagagccgccgccgcacgtcaaattcctgttggccaccaccgatccgcaa
aagctgccggtgaccattctctcgcgctgtctgcaattccacctcaaggcgctggacgtc
gatcagatccgccagcagctggaaacggtgctgacggcggagcagatcaccagcgacgcc
cgcgcgctgcagctgctggcgcgcgccgccgacggcagcatgcgcgatgcgctgagcctg
accgatcaggcgatcgccatggggcaggggcaggtgaccgccgccaccgtcagccagatg
ctcggcacgctcgatgacgaacagccgctggcgatcctcgaagcgctggtcagcgccgac
ggcgaaaaggtgatggctcaggtcgcacaggccgcttcgcgcggcgtggactgggaaaac
ctgctggtggagacgctggcgctgctgcaccgcattgcgatggtgcagctgctgccttcg
atgctcgacaatcagtacgccgccgtggaacaacggctgcgcgagctggcgcgcaccctg
ccgccggccgatgtgcaactttactaccagacgctgttggtcggccgcaaagagctggcc
tatgcgccggatcgccgcatgggggttgagatgaccctgctgcgcgcgctggcgtttcac
ccgaaagcggtgatcccggagccggtggcgttggtgcagaccgcgccggcgccgatggcg
cagccgcaggccgccgcatcgcaacagccgccgcagtttcaggacgcaccgccgccgcta
gggcagccggccgcgccaccgcggcaatcatcgaccccattaccggatgccaccgcccag
ctgttgaaagcgcggtcccagctgcagcggcagcagggagcatccacaccaaaaaagaat
gagccggcggcgccaggaatagcgcggccggcaaactcggcgctggggcgtttggcttcc
gtgaccgagcgtagccagcagcgtctggcggagaagaaggtgccggaaaaaccggccaag
ccggaagcctatcgctggcgcgcgcagaccgagccggaagcggcgccggaaccgctggcg
acgccgaaagcgctgcgcacggcgttggagcacgagaaaacgccggagctggccgccaag
ctggtggtggagtcgctggagcgcgacgcctgggcggcggaaatcgataagctcaagatc
ccgaaactggtgcagcagctggcgttgaacgccttcaagcagcagccggaagcgggcaag
atttgcctccatctgcggtcttcgcagcgtcatctgaattcgccttcggcgcagaagacg
ctggccgaagcgctcggcgagctgtacggcagcccgatcgagctgaccgtgatagaggac
gataatccggcggagcgcaccccgctggaatggcgacaagccatctatgaagaaaagctg
gcgcaggcgcgccagtccatcgttgcggatacccatattcagacgctgtgccggttcttc
gacgcggatctggatgaagagagtatccgccccctttaa
DBGET
integrated database retrieval system
