Serratia marcescens SM39: SM39_2056
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Entry
SM39_2056 CDS
T03592
Symbol
pspF
Name
(GenBank) DNA-binding transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
smar
Serratia marcescens SM39
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smar03000
]
SM39_2056 (pspF)
Transcription factors [BR:
smar03000
]
Prokaryotic type
Other transcription factors
Others
SM39_2056 (pspF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA_16
AAA
UPF0175
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BAO34077
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All DBs
Position
2112787..2113794
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AA seq
335 aa
AA seq
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MNEQPENLLGEANAFVDVLEQVSQVAKLNKPVLVIGERGTGKELIAHRLHYLSNRWQGPF
ISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKL
LRVIEYGQLERVGGSQPLRVDVRLVCATNDDLPALAAAGKFRADLLDRLAFDVVQLPPLR
QRRPDIMLLAEHFAIQMCRELALPLFPGFTERARQTLLEYGWPGNVRELKNVVERSVYRH
GDSDSPLDEIIINPFAPREAAPVAPVPEGVGALPALPLDLKNWQLEQEKVLIEAALQQGR
FNQRKAAQLLGLTYHQLRGMLKKHALLQNGEADEE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcagccagagaatttgttgggcgaggcaaacgcctttgtcgacgtattggag
caagtctcccaggtggcaaagctgaacaaaccggtgctggtgatcggcgagcgcggcacc
ggcaaggagctgatcgcccaccgcctgcactacctttccaaccgctggcaagggccgttc
atctcgctcaactgcgcggcgctgaatgaaaacctgctggattccgaactgttcggccac
gaggccggcgcctttaccggcgcgcagaaacgccatctggggcgcttcgagcgcgccgat
ggcggcacgctgtttctcgatgagctggcgaccgcgccaatgctggtgcaggagaagctg
ctgcgggtgatcgaatacggccagttggagcgcgtgggcggcagccagccgctgcgggtg
gatgtgcgcctggtgtgcgcaaccaacgacgatctgccggcgctggcggcggcgggcaaa
ttccgcgccgatctgctggatcggctggcgttcgacgtggtgcagctgccgccgctgcgc
caacggcggcccgatatcatgctgctggccgagcatttcgccattcaaatgtgccgcgaa
ctggcgctgccgctgtttcccggctttaccgaacgcgccaggcaaacgttgctcgaatat
ggctggccgggcaacgtgcgtgaactgaaaaacgtggtcgaacgttcggtctatcgtcac
ggcgacagcgacagcccgcttgacgaaatcatcatcaacccgtttgcgccgcgtgaggcg
gcgccggtcgcgcccgttcctgaaggcgtcggcgcgttaccggcgctgccgctggatttg
aaaaactggcagctggagcaggagaaggtattgatcgaagcggctctgcagcaggggcgt
ttcaatcagcgcaaggcggcgcagctgctggggctcacctatcatcagctgcgcggcatg
ctgaaaaaacatgcgctgctgcaaaacggcgaagcggacgaggaataa
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