Serratia marcescens SM39: SM39_2232
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Entry
SM39_2232 CDS
T03592
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smar
Serratia marcescens SM39
Pathway
smar00061
Fatty acid biosynthesis
smar00071
Fatty acid degradation
smar01100
Metabolic pathways
smar01212
Fatty acid metabolism
smar02024
Quorum sensing
smar04146
Peroxisome
Module
smar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SM39_2232 (fadD)
00071 Fatty acid degradation
SM39_2232 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SM39_2232 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SM39_2232 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smar01004
]
SM39_2232 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smar04147
]
SM39_2232 (fadD)
Enzymes [BR:
smar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SM39_2232 (fadD)
Lipid biosynthesis proteins [BR:
smar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SM39_2232 (fadD)
Exosome [BR:
smar04147
]
Exosomal proteins
Exosomal proteins of breast milk
SM39_2232 (fadD)
Exosomal proteins of breast cancer cells
SM39_2232 (fadD)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4235
Motif
Other DBs
NCBI-ProteinID:
BAO34249
UniProt:
A0AAT9E0X9
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All DBs
Position
complement(2298374..2300062)
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AA seq
562 aa
AA seq
DB search
MDKVWLKRYPADVPAEIDADRYSSLIEMFEHAVQRYADQPAFINMGEVMTFRKLEERSRA
FAAYLQNELGLKKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELEHQLNDS
GASAIVIVSNFAHTLEKVVFNTQVKHVILTRMGDQLSAAKGTLVNFVVKYIKRLVPKYNL
PDAISFRSALQRGRRLQYVKPDIINTDLAFLQYTGGTTGVAKGAMLTHRNMQANLEQAKA
AYSPLFREGQELVVTALPLYHIFALTVNCLLFIDLGGRNLLITNPRDIPGLVKELGKYPF
TAMSGVNTLFNALLNNEEFHKLDFSTLRFSVGGGMSVQKAVAENWEKTTGKHLLEGYGLT
ECAPLVAGNPYDLKHYSGSIGLPVPSTDIRLLDDNGQDVPPGEPGELWVKGPQVMLGYWQ
RPEATDEVLKDGWLATGDVVTVDEQGFVRIVDRKKDMILVSGFNVYPNEIEDVVSQHPKV
LECAAIGVPSEVSGETVKICVVKKDASLTKEELLTHCRRHLTGYKVPKIVEFRDELPKSN
VGKILRRELRDELKTPKPADAA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
ttggataaggtctggttaaaacggtatccggcagatgtgcccgcagagattgatgccgat
cgctattcgtcgttgatcgaaatgtttgagcatgccgtgcagcgctatgccgatcagccc
gcctttatcaacatgggcgaggtgatgaccttccgcaaactggaagagcgcagccgggct
ttcgcggcttacctgcaaaatgaactgggcctgaagaagggcgaccgcgtcgcgctgatg
atgcctaacctgttgcaataccccatcgccctgttcggcattctgcgcgccggtatggtg
gtggttaacgtcaacccgctgtataccccgcgcgagctggaacaccagttgaacgacagc
ggcgccagcgccatcgtcatcgtctccaactttgcccatacgttggaaaaagtggtgttc
aacacccaggtcaagcacgtgatcctcacgcgcatgggcgatcagctttcggccgccaaa
ggcacgctggtcaactttgtggtcaagtacatcaagcgcctggtgcccaaatataacctg
ccggacgccatttcattccgcagcgcgctgcagcgcggacgccgtctgcaatatgtaaag
ccggacatcattaataccgatttggccttcctgcaatacaccggcggcaccaccggcgta
gcgaaaggcgcgatgctgacgcaccgcaacatgcaggccaacctcgaacaggccaaagcc
gcctactcgccgctgttccgtgaagggcaggaactggtggtgacggcgttgccgctgtac
cacattttcgcgctgacggtgaactgcctgctgtttatcgatctgggcgggcgcaatttg
ctgatcaccaacccgcgcgatattccggggctggtgaaggagctgggcaaatacccgttc
accgccatgagcggggtgaataccttgttcaacgcgttgctgaacaacgaagagttccac
aaactcgacttctccacgctgcgtttctcggtcggcggcggcatgtcggtgcaaaaagcg
gtggccgagaactgggagaaaaccaccggcaaacacctgctggaaggctatggcctgacg
gagtgcgcgccgctggtggccggcaacccttacgatctgaaacactacagcggcagcatc
ggcttaccggtaccgtcgacggatattcggctgttggacgacaatggccaggatgtgccg
ccgggagaaccgggcgaactgtgggtcaaaggcccgcaagttatgttaggctattggcaa
cgcccggaagctaccgacgaagtgctgaaagatggctggttggcgaccggtgatgtggtg
accgtggacgagcaggggtttgtgcgcatcgtcgaccgcaagaaagacatgatcctggtc
tctggtttcaacgtttatccgaacgagatcgaggacgtggtcagccagcatccgaaggtg
ctggaatgtgcggcgatcggggtgcccagcgaggtctccggcgagacggtgaagatctgc
gtggtgaagaaagacgcctcgctgaccaaggaagagctgttgacccattgccgtcggcac
ctgaccgggtataaagtgcctaaaattgttgagttccgcgatgaattgccgaagtcgaac
gtcggcaagattttgcggcgagaactgcgcgatgagctaaaaacgccgaaaccggccgat
gccgcctag
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