KEGG   Serratia marcescens SM39: SM39_2443
Entry
SM39_2443         CDS       T03592                                 
Name
(GenBank) PIN domain-containing protein
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
smar  Serratia marcescens SM39
Brite
KEGG Orthology (KO) [BR:smar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smar03016]
    SM39_2443
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:smar02048]
    SM39_2443
Transfer RNA biogenesis [BR:smar03016]
 Prokaryotic type
  tRNA degradation factors
   SM39_2443
Prokaryotic defense system [BR:smar02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    SM39_2443
SSDB
Motif
Pfam: PIN DUF5615 PIN_12
Other DBs
NCBI-ProteinID: BAO34448
UniProt: A0AAT9E8G9
LinkDB
Position
complement(2497917..2498315)
AA seq 132 aa
MFSHMLDTNIVIYVIKRRPLEVLEAFNRYAGKMVISSITYGELVHGVEKSARPAVNARVV
EDFVSRLDILDYSAKAASHYGNIRAALERQGTPIGVNDLHIAGHARSEGLILVTNNRREF
ERVEGLRLENWL
NT seq 399 nt   +upstreamnt  +downstreamnt
atgttcagtcatatgctggacaccaacattgttatctatgtcattaagcgccggccgctg
gaagtgctggaggcattcaatcgctatgcaggtaaaatggtcatttcgtcaatcacctat
ggcgaattggttcacggggtggagaaaagcgctcgcccagcggtgaacgccagagtggtt
gaggattttgtctcccgattggacattctcgattacagcgccaaagcggcatcgcactac
ggcaacatccgggctgcgctggaacgccagggaacgcctattggcgtaaacgatctacat
atcgccgggcatgcgcgcagcgaaggattgatcctggtgaccaataatcgacgcgaattt
gaacgcgttgagggtttacggctggaaaattggttgtaa

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