Serratia marcescens SM39: SM39_2866
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Entry
SM39_2866 CDS
T03592
Symbol
gyrA
Name
(GenBank) DNA gyrase type II topoisomerase, subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
smar
Serratia marcescens SM39
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smar03032
]
SM39_2866 (gyrA)
03400 DNA repair and recombination proteins [BR:
smar03400
]
SM39_2866 (gyrA)
Enzymes [BR:
smar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SM39_2866 (gyrA)
DNA replication proteins [BR:
smar03032
]
Prokaryotic type
DNA Topoisomerases
SM39_2866 (gyrA)
DNA repair and recombination proteins [BR:
smar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SM39_2866 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
BAO34847
UniProt:
A0AAT9F1A3
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Position
complement(2930584..2933226)
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AA seq
880 aa
AA seq
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MSDLAREITPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDRAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLAEVVNGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YLRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYALTQLQVTFGINMVALHQGQPKLLNLKDILEAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKVALVAQPWDLGNV
SAMLERAGDDAARPEWLEPEFGIRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLNFIAELIFILESPERLMEVIREELVAVKELYNDGRRTEITANTSDINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGRHVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPETQVRSMGRTATG
VRGINLGEGDSVISLIVPRGEGDILTVTQNGFGKRTAVTEYPTKSRATQGVISIKVSERN
GQVVGAVQVETSDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDENVVGLQRVA
EPVEDEELDSLEPGAEVVEEDTTPLDDGDDAAEPMDDDNV
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtaaacatcgaagacgagttgaaaaactcg
tatctggactatgcgatgtccgttattgtcggacgtgcgctgccagatgttcgtgatgga
ctgaagccggttcaccgccgcgttctgtacgcgatgagcgtattgggtaacgactggaat
aaaccatacaagaaatcggcccgtgtcgtcggggacgtgatcggtaaatatcacccgcac
ggtgacagagcggtttacgacactatcgtgcgtatggctcagccgttttcactgcgctac
atgctggtggacggtcagggtaacttcggctccgtcgacggcgactccgccgcggcgatg
cgttataccgaagtgcgcatgtccaagattgctcacgaactgttggcggatctggaaaaa
gaaaccgtcgacttcgtgcctaactatgatggcaccgagcagatcccggccgtcatgccg
accaagatcccgaacctgctggtcaacggttcgtcgggcatcgccgtgggcatggccacc
aatatcccgccgcacaacctggcggaagtcgtcaacggctgcctggcctatatcgacgat
gaaaacatcagcatcgaagggctgatggaacacatcccggggccggacttcccgacggcg
gcgatcatcaacggccgtcgcggcattgaagaggcctaccgcaccgggcgcggcaaagtc
tacctgcgcgcgcgcgcggaagtggaagccgacgccaagaccgggcgcgaaaccatcatc
gttcacgagatcccgtatcaggtgaacaaggcgcgtctgatcgagaagatcgccgagctg
gtgaaagaaaagcgcgtggaaggcatcagcgcgctgcgcgacgagtccgataaagacggc
atgcgcatcgtgatcgaagtcaaacgcgacgcggtcggcgaagtggtgctgaacaacctg
tatgcgctgacgcaactgcaggtcactttcggcatcaacatggtcgcgctgcatcagggc
cagcctaagctgctgaacctgaaagacatcctcgaagccttcgtgcgtcaccgccgcgaa
gtggttacgcgccgcaccatcttcgaactgcgcaaggcccgcgaccgcgcccatatcctg
gaagcgctggctatcgcactggccaacatcgatccgatcatcgagctgattcgccgtgcg
ccgaccccggccgaagcgaaagtcgcgctggtggcgcagccgtgggatctgggcaacgtc
agcgccatgctggagcgcgccggtgacgacgccgcccgccctgagtggctggagccggag
ttcggcatccgcgacggcaaatactacctgaccgagcagcaggctcaggcgattctggat
ctgcgcctgcagaaactgaccggcctggagcacgagaagctgctggacgaatataaagag
ctgctcaactttatcgccgagctgatctttatcctggaaagcccagagcgcctgatggaa
gtgatccgcgaagagctggtggcagtcaaagagctgtacaacgacggccgccgcaccgag
atcaccgccaatacttccgacatcaacatcgaagacctgatcaatcaggaagacgtggtg
gtgaccctgtctcaccagggctacgtgaagtatcagccgctgtccgactatgaagcgcag
cgccgcggcggcaaaggcaagtctgcggcgcgtatcaaagaagaagactttatcgatcgt
ctgctggtggccaacacccacgatacgatcctgtgcttctccagccgtggccgcctgtac
tggatgaaggtgtaccaactgcctgaagccagccgcggcgcgcgcggtcgcccaatcgtc
aacctgctgccgctggaagccgatgagcgtatcaccgccattctgccggtgcgcgagtat
gaagaagggcgccacgtgttcatggccaccgccagcggtaccgtgaagaaaactgcgttg
accgagttcagccgcccacgcagcgccggcatcatcgccgtcaacctcaacgagggtgac
gagctgatcggtgtcgatctgaccgacggcagcaacgaagtgatgctgttctccgccaac
ggtaaagtggtgcgcttcccggaaacgcaggtacgttcgatgggccgtaccgcgaccggc
gtgcgcggcatcaacctcggcgaaggcgacagcgtgatctcgctgattgtgccgcgcggc
gaaggcgacatcctgaccgttacgcaaaacggcttcggtaaacgtaccgcggtgaccgag
tacccgaccaagtcgcgcgccacccagggggttatctccatcaaggtgagcgagcgtaac
ggccaggtggtcggcgccgtgcaggtggaaaccagcgaccagatcatgatgatcaccgat
gccggcacgctggtgcgtacccgcgtttcggaagtcagcgtggtgggccgtaacacccag
ggcgtgacgctgatccgcacggcggaagacgaaaacgtcgtcggtctgcagcgcgtggcc
gagccggtggaagacgaagagctggacagcctggagccgggcgcggaagtggtggaagaa
gacaccacgccgctggacgatggcgacgacgcggctgagccgatggatgacgacaacgtt
taa
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