Serratia marcescens SM39: SM39_2975
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Entry
SM39_2975 CDS
T03592
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
smar
Serratia marcescens SM39
Pathway
smar00071
Fatty acid degradation
smar00280
Valine, leucine and isoleucine degradation
smar00310
Lysine degradation
smar00362
Benzoate degradation
smar00380
Tryptophan metabolism
smar00410
beta-Alanine metabolism
smar00640
Propanoate metabolism
smar00650
Butanoate metabolism
smar00907
Pinene, camphor and geraniol degradation
smar00930
Caprolactam degradation
smar01100
Metabolic pathways
smar01110
Biosynthesis of secondary metabolites
smar01120
Microbial metabolism in diverse environments
smar01200
Carbon metabolism
smar01212
Fatty acid metabolism
Module
smar_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SM39_2975 (fadJ)
00650 Butanoate metabolism
SM39_2975 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
SM39_2975 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SM39_2975 (fadJ)
00310 Lysine degradation
SM39_2975 (fadJ)
00380 Tryptophan metabolism
SM39_2975 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SM39_2975 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SM39_2975 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SM39_2975 (fadJ)
00930 Caprolactam degradation
SM39_2975 (fadJ)
Enzymes [BR:
smar01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SM39_2975 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SM39_2975 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SM39_2975 (fadJ)
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Paralog
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GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
BAO34952
UniProt:
A0AAT9F1B5
LinkDB
All DBs
Position
complement(3049139..3051304)
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AA seq
721 aa
AA seq
DB search
MSFENALHEQRAKPSAFQLTIRPDNIGVITIDVPGDKVNTLKAEFVEQVNDVLIRAQQHT
ALEGLVIVSGKPDSFIAGADITMIAACTSAKEAETLARKGQSTLAQIAAFPVPVVAAIHG
ACLGGGLELALACHGRVCSLDDKTALGLPEVQLGLLPGSGGTQRLPRLVGAAKALDMILT
GKHIRARQALRMGLVDDAVPQSILLQTAIERVKQGWKHQRELPWQDRLLNGPLGRSLLFS
IVRKKTLAKTHGNYPAAERIIQVVRTGLDHGSASGYEAEARAFGELAMTPQSAALRSLFF
ASTALKKERGGNAQPHALHRVGILGGGLMGGGIACVTATRGGLPVRIKDINETGINHALK
YSWDVLGKRVRRKRMRPAERQKQMMLISGSTDYTGFEQVDIVVEAVFEDLALKQQMVAEV
EANCAPHTVFASNTSSLPIGRIAEKAQRPQQVIGLHYFSPVDKMPLVEVIPHAGTSEETI
ATTVALAHKQGKTAIVVGDSAGFYVNRILAPYINEAARCLLEGEPIESLDKALVDFGFPV
GPITLLDEVGIDVGTKIIPVLVEALGPRFAAPAAFDAVLKDGRKGRKNGRGFYLYPSEGQ
QRQRRKRADTSLYTLLGVTPKAHMLPATVAQRCVMMMLNEAARCLDEGVIRSARDGDIGA
VFGIGFPPFLGGPFRYMDELGAEKVVKTLDYLRQQHGEHFAPCERLQRMAQQGERFYPLG
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgaaaacgcattgcatgaacagcgcgccaaaccgtcggcctttcagctgacg
attcgccccgacaacatcggcgtgatcaccatcgacgtgccgggcgacaaggtgaacacg
ctcaaggccgagttcgtcgaacaggtcaacgacgtgctgatccgggcgcagcagcatacc
gcgctggaagggctggtgatcgtttccggcaagccggactcgtttatcgccggcgccgac
atcactatgattgccgcttgcaccagcgccaaagaggcggaaacgctggccaggaaaggg
cagagcacgctggcgcagatcgccgcgttcccggtgccggtagtggcggccattcacggc
gcctgcctgggcggcggactggagctggcgctggcctgccacggccgcgtctgttcattg
gatgacaaaaccgcgctcgggctgccggaagtgcagctgggcctgctgccgggctccggc
ggcacgcagcgcctaccgcgcctggttggcgccgccaaggcgctggacatgatcctgacc
ggcaagcacattcgcgcccgccaggcgttgcgcatggggttggtggacgacgccgtgccg
cagtcgattctgttgcagaccgccatcgagcgggtgaagcagggctggaagcatcagcgc
gagctgccgtggcaggatcgcctgctcaacggcccgctgggcagaagtctgctgttcagc
atcgtgcgcaagaaaacgttggcgaaaacccatggcaactacccggcggcggagcgcatc
attcaggtggtgcgcaccgggctggatcacggcagcgccagcggctatgaggctgaagcg
cgcgcctttggcgagctggcgatgacgccgcagtcggcggcgctgcgcagcctgttcttc
gcttccaccgcgctgaaaaaggagcggggcggcaatgcccagccgcacgccctgcatcgc
gtcggcattctcggcggcggcctgatgggcggcggcatcgcctgcgtcaccgccacccgc
ggcggattgccggttcgcatcaaagacatcaatgaaaccggtatcaaccatgcgctgaaa
tacagctgggacgtgctcggcaagcgggtgcgccgcaagcgcatgcgcccggcggaacgg
caaaagcagatgatgctgatctccggctctaccgattacactggctttgaacaggtggat
atcgtggtcgaggcggtgttcgaagatctggcgctgaagcagcagatggtagccgaggta
gaagccaactgcgcgccgcataccgtgttcgcctccaatacttcctcgctgcctatcggc
cgcatcgccgaaaaggcccagcggccgcagcaggtgatcggcctgcactacttcagcccg
gtggacaagatgccgttggtggaagtgatcccgcacgccggcaccagcgaagagaccatc
gccaccaccgtggcgctggcgcacaagcagggcaaaaccgccatcgtggtgggcgacagc
gccggtttttatgtcaaccgcatcctggcgccgtacatcaacgaagcggcgcgctgcctg
ctggaaggcgagccgattgagtcgctggacaaggcgctggtggacttcggtttcccggtc
ggcccgatcaccctgctggatgaagtgggcatcgacgttggcaccaagatcattcccgtg
ctggtcgaggcgctggggccgcgcttcgccgcgcctgccgcgttcgatgcggtgctgaaa
gacgggcgcaaagggcgcaagaacggccgcggcttctatctctacccgagcgaagggcag
cagcggcagcggcgcaaacgtgcggatacctcattgtatacgctgctcggcgtcacgccg
aaggcgcacatgctgccggcgaccgtcgctcaacgctgcgtgatgatgatgctgaacgaa
gcggcgcgctgcctggacgaaggcgtgatccgcagcgcgcgcgacggcgacatcggcgcg
gtgttcggcatcggcttcccgccgttcctcggcggcccgttccgctatatggacgagctc
ggcgccgagaaagtggtgaagacgctggactacctgcgtcagcagcacggcgagcatttc
gccccgtgcgaacgcctgcagcgcatggcgcagcagggcgagcgcttttacccgctgggg
agctga
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