Serratia marcescens SM39: SM39_3157
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Entry
SM39_3157 CDS
T03592
Name
(GenBank) putative adaptative response regulatory protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
smar
Serratia marcescens SM39
Pathway
smar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SM39_3157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smar03000
]
SM39_3157
03400 DNA repair and recombination proteins [BR:
smar03400
]
SM39_3157
Enzymes [BR:
smar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SM39_3157
Transcription factors [BR:
smar03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SM39_3157
DNA repair and recombination proteins [BR:
smar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SM39_3157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_23
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
BAO35125
UniProt:
A0AAT9EB06
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Position
complement(3247305..3248765)
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AA seq
486 aa
AA seq
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MNTQQQALYDALRARDRKFDGRFFVGVSSTGIYCRPVCSARTPKLENCTFYPSAAAAELA
GFRPCLKCRPELAPGLALIDLGNRYAQVAVQLIEQGYLSEHSCEALAARLGISDRHLRRI
FAEQFGASPIDYAQSHRLLQAKRLLADTDLPLSEVAFAAGFGSLRRFNELFKARYRLIPS
ALRSGGARGERAAASGLVFHLGYRPPYDWDRMLNFLQARAVQGVERVEGRRYLRSIAVNQ
GGTEYRGWVSVQPEEARNRVRVEIAPALSLVTTEVLRRVRLLFDLDAAPDRINEALGSLA
ADAPGLRLPGCVNSFEQAARAVLGQLVSVKMAATFAGRMAERWGEPLAAPHEGITHVFPS
AERVAQLQPEALRPLGVQLKRAAALIEIARALGEGRLQLDNVLDIDQGIRALTALPGIGS
WTASYIAMRAWSWPDVFLAGDYLIKQRFPGMTPRQIERYAERWRSWRSYATLHLWHNDGW
APEGED
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaatactcaacagcaagcgttgtacgacgcgctgcgcgcgcgtgaccgcaaattcgac
ggccgctttttcgtcggcgtctcttccaccggcatctattgccgcccggtgtgcagcgcc
cgcacgccgaagctggaaaactgcaccttctatccgagcgcggcggcggccgagttggcg
ggctttcgcccctgtcttaaatgccggccggagctggcacccggcctggcgctgatcgat
ctgggcaaccgctatgcgcaggtggcggtgcagctcatcgagcagggctatctgtccgaa
cacagctgcgaagcgctggcggcgcggctcggcatttccgatcgccacctgcggcgcatc
ttcgccgaacagtttggcgcttcgccgatcgattacgcgcagtcgcaccggttgctgcag
gccaaacgcctgctggcggacaccgatctgccgctcagcgaggtggcgttcgccgccggt
ttcggcagcctgcggcgtttcaacgagctgttcaaggcgcgctatcgcctgatcccgtct
gcgctgcgcagcggcggcgcgcgcggtgagcgggccgccgccagcgggctggtgttccat
ctgggctatcggccgccctatgactgggatcgcatgctgaatttcctgcaggcgcgcgcc
gtgcagggcgtggagcgggtcgagggccgccgctacctgcgttcgatcgccgtcaaccag
ggcggcacggaatatcgcggctgggtcagcgtgcagccggaggaagcgcgcaaccgggtc
agggtcgagatcgcgcctgcgctcagtttggtgacgacggaggtgctgcgccgcgtgcgc
ctgctgtttgatctggacgccgcgccggatcgcatcaatgaggcgctgggctcgctggcg
gccgatgcgccggggctgcgcctgccgggctgcgtgaacagcttcgagcaggcggcgcgg
gcggtgctggggcagttggtcagcgtgaaaatggcggcgaccttcgccgggcggatggcc
gaacgctggggagagccgctggcggcgccgcacgagggcattacccacgttttccccagc
gccgaacgggtggcgcagctgcagcccgaagcactgcgcccgctaggggtgcagctgaag
cgcgcggcggcgctgatcgagatcgcccgcgcgctgggcgaagggcggctgcagctcgac
aacgtgctggatatcgaccagggcatcagggcgctgaccgcgctgccgggcatcggcagc
tggaccgccagctatatcgcgatgcgcgcctggtcttggccggacgtgtttctggccggc
gactacctgatcaaacagcgttttcccggcatgacgccgcgccagatcgaacgctatgcc
gaacgttggcgctcgtggcgctcttacgccacgctgcatctgtggcacaacgacggctgg
gcgccggaaggggaggattga
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