Serratia marcescens SM39: SM39_3202
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Entry
SM39_3202 CDS
T03592
Symbol
xseA
Name
(GenBank) exonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
smar
Serratia marcescens SM39
Pathway
smar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SM39_3202 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smar03400
]
SM39_3202 (xseA)
Enzymes [BR:
smar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SM39_3202 (xseA)
DNA repair and recombination proteins [BR:
smar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SM39_3202 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
BAO35169
UniProt:
A0AAT9E575
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All DBs
Position
3294551..3295927
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AA seq
458 aa
AA seq
DB search
MSLPVSPSIFTVSRLNQTVRQLLEMEMGQIWLSAEISNLSQPASGHWYFTLKDDRAQVRC
AMFRNSNRRVTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQR
LSAEGLFDQQFKQPLPAPAKRVGVITSASGAALHDILQVLQRRDPSLPIVIYPTSVQGAE
APMQIVRAIEAANRRDECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELVSRNQLELLRQLQSQQQRLEMAMDYYLAQRQQQFTRIH
HRLQQQHPHLRLARQQTLLFKLQRRMEDGLQQQLRLAARRSERAQQRLAQVQPQGRIHRY
QQRVQQQEYRLQQAMERQLNAYRQRFGVACSQLETVSPLATLARGYSVTQTPRGELLKTT
KQAQVGELLKTRLQDGWVESEVKTITVAKKPRKKRAAE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctacctgtttcgccttccatttttaccgtaagccgcctcaatcagacggttcgc
caactgctggaaatggaaatggggcagatttggctctccgccgagatctccaacctctcc
cagcccgcctccggccactggtatttcacgctgaaagacgatcgcgcccaggtgcgctgc
gcgatgttccgcaacagcaaccgccgcgtcaccttccggccgcaaaacggccagcaggta
ttggtgcgcgccagcatcacgctgtatgaaccgcgcggcgactaccagctgatcgccgag
agcatgcagcccgccggcgacggcctgctgcagcaacagttcgagcagctgaaacagcgc
ctgagcgccgaagggctgttcgatcagcagttcaagcagccgctgcccgccccggccaaa
cgcgtcggggtgatcacctccgccagcggcgcggcgctgcacgatattctgcaggtattg
cagcggcgcgatccgtcgctgccgatcgtcatctaccccacctcggtgcagggcgcggaa
gcgccgatgcagatcgtgcgcgccatcgaggccgccaaccgccgcgacgaatgcgacgtg
ctgatcgtcggccgcggcggcggttcgctggaggatttgtggagcttcaacgacgaacgc
gtggcgcgggcgatcttcgccagccgcattccaatcgtcagcgccgtaggccatgaaacc
gacgtcaccatcgccgatttcgtcgccgatctgcgcgcaccgaccccttccgccgccgcc
gaactggtcagccgcaatcagctcgagctgttgcgccagctgcaatcgcagcagcagcgg
ctggagatggcgatggattactacctggcgcagcgccagcagcagttcacccgcattcac
caccgtttacagcagcagcatccgcatctgcgcctggcgcgccagcagacgctgctgttc
aagctgcagcgccggatggaagacggcctgcagcaacagctgcgcctggccgcccgccgc
agcgaacgcgcccagcagcggctggcgcaggtgcagccgcagggccgcattcaccgctac
caacagcgcgtgcagcagcaggaataccgcctgcagcaggcgatggagcggcagctcaac
gcctaccgccagcgcttcggcgtggcctgcagccagctggaaaccgtcagcccgctggcg
acgctggcgcgcggctacagcgtgacgcaaaccccgcgcggcgagctgctgaaaaccacc
aagcaggcgcaggtcggcgaactgctgaaaacccgcctgcaggacggctgggtggaaagc
gaggtgaaaaccatcaccgtcgccaagaagccgcgcaagaaacgcgcggccgagtag
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