Serratia marcescens SM39: SM39_4542
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Entry
SM39_4542 CDS
T03592
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
smar
Serratia marcescens SM39
Pathway
smar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SM39_4542 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smar03400
]
SM39_4542 (mutM)
Enzymes [BR:
smar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SM39_4542 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SM39_4542 (mutM)
DNA repair and recombination proteins [BR:
smar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SM39_4542 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
BAO36461
UniProt:
A0AAT9F4T0
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All DBs
Position
4736668..4737483
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AA seq
271 aa
AA seq
DB search
MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILTLSDRPVLSVQRRAKYLL
IELENGWIIVHLGMSGSLRMLREENEDEAGKHDHVDLVISNGMILRYTDPRRFGAWLWCE
DLATSSVLAHLGPEPLSEAFNGDYLYEKSRNKRTLIKPWLMDNKLVVGVGNIYASESLFS
SGILPDRPAGSLSKAEAALLAQTIKAVLQRSIEQGGTTLRDFLQSDGKPGYFAQELQVYG
RAGEPCRACGTPIESAKHGQRSTFFCRRCQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccggaagttgagacgagcagacgcggtatagagccttatcttgtcggc
cacagcattcagtatgcggtggtgcgcaacgcgcgcctgcgctggccggtttccgagcag
atcctgacgctgagcgatcggccggtgctcagcgtgcagcgccgggccaaatacctgctg
atcgagctggagaacggttggattatcgtgcacctgggcatgtcgggcagcctgcgcatg
ctgcgcgaggaaaacgaagacgaagccggcaaacacgaccacgtcgatctggtgatcagc
aacggcatgatcctgcgctataccgatccgcgccgtttcggcgcctggctgtggtgcgaa
gatttggcgaccagcagcgtgttggcgcatctggggccggaaccgctgagcgaagcgttc
aacggcgactacctgtatgaaaaatcacgcaataagcgcacgctgatcaaaccgtggctg
atggataacaagctggtggtcggggtcggcaatatttacgccagcgaatcgctgttcagc
tccgggatcttgcccgatcgtcccgcgggatcgttgagcaaagctgaagcggcgctgctg
gcgcagaccatcaaggcggtgttgcagcgctctatcgagcagggcggcacgacgttgcgc
gactttttgcagtcggacggaaaaccgggatatttcgcgcaggaactgcaggtttacggg
cgggcgggagaaccctgccgcgcgtgcggcacgccgatcgaatccgccaagcacgggcag
cgcagcaccttcttttgccgccgctgccagcgctga
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