Serratia marcescens SM39: SM39_4703
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Entry
SM39_4703 CDS
T03592
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
smar
Serratia marcescens SM39
Pathway
smar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SM39_4703 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smar03019
]
SM39_4703 (orn)
03009 Ribosome biogenesis [BR:
smar03009
]
SM39_4703 (orn)
Messenger RNA biogenesis [BR:
smar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SM39_4703 (orn)
Ribosome biogenesis [BR:
smar03009
]
Eukaryotic type
Pre-60S particles
RNases
SM39_4703 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF8174
Motif
Other DBs
NCBI-ProteinID:
BAO36619
UniProt:
A0AAT9F583
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All DBs
Position
4908494..4909039
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AA seq
181 aa
AA seq
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MTGNENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVIAVHQSDEQLALMDE
WNVRTHTGSGLVERVKASRQDDRAAELETIAFLQQWVPAGKSPICGNSVGQDRRFLFRYM
PELEAYFHYRYLDVSTLKELARRWKPEILAGFKKQGTHQALDDIRESVAELAYYREHFIQ
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaaacgaaaataacctgatttggatcgatttggagatgaccgggctggatccc
gagcgtgaccgcatcatcgagatcgccacgctggtcaccgacgccaacctgaacatcctg
gcggaagggccggtgatcgccgtgcatcagtccgacgaacagctggcgctgatggacgag
tggaacgtgcgcacccataccggcagcgggctggtggagcgggtgaaagccagccgccag
gacgatcgcgccgccgagctggaaacgatagccttcctgcagcagtgggtgccggccggc
aaatcgccgatctgcggcaacagcgtgggccaggatcgccgtttcctgttccgctatatg
ccggagctggaggcctacttccattaccgctacctggacgtcagcacgctgaaggagctg
gcgcgccgctggaagccggaaattctcgccggctttaaaaagcagggcacccatcaggcg
ctggacgacattcgtgaatcggtggccgaactggcgtattaccgcgaacatttcatccag
ctctaa
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