Serratia marcescens SM39: SM39_4775
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Entry
SM39_4775 CDS
T03592
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smar
Serratia marcescens SM39
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smar03016
]
SM39_4775 (truB)
Enzymes [BR:
smar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SM39_4775 (truB)
Transfer RNA biogenesis [BR:
smar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SM39_4775 (truB)
Prokaryotic type
SM39_4775 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BAO36690
UniProt:
A0AAT9F5C8
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All DBs
Position
4979511..4980455
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQIVQERPVNFTQAQLDAALDTFRGDIQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARSITVYELQFIRWEGDELELEIHCSKGTYI
RTITDDLGELLGCGAHVIYLRRLQVATYPIARMVTLEQLNALLEQAQEQAIAPGELLDPL
LMPMDSPVENYPEVNLLPVVAGYVKQGQPVQVAGAPASGLVRITEGDERKFIGVGDIAED
GRVAPRRLVVEHFD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccctcgtcgccgcggccgtgatatccacggcgtgctgttgctggacaagccg
cagggtttgtcgtccaacgatgcgctgcaaaaagtaaaacgcctgtacaacgccaaccgg
gcgggccataccggcgcgctcgatccgctggcgaccggcatgctgcctatctgcctgggc
gaagcgaccaagttttcgcaatatctgctcgattccgacaagcgctatcgggtgattgcc
aagctgggacagcgtaccgatacctccgacgccgacggccagatcgtgcaggagcgcccg
gtgaacttcacccaggcgcagctcgacgcggcgctggacaccttccgcggcgatatccag
caggtgccgtcgatgtattcggcgctgaaataccagggcaagaaactctacgagtatgcg
cgccagggcattgaagtgccgcgcgaagcgcgcagcatcacggtgtacgagctgcagttt
atccgttgggaaggggatgagctggagctggagatccactgctcgaaaggcacctacatc
cgcaccatcactgacgatctcggcgagctgctgggctgcggcgcgcacgtgatctatctg
cgccgcctgcaggtggcgacttacccgatcgcgcgcatggtgacgctggaacagctgaac
gccctgctggagcaagcgcaggaacaagcgatcgctcccggcgagctgctcgatccgctg
ctgatgccgatggacagcccggttgagaactatccggaagtgaatttgctgccggtggtg
gcgggctacgtcaagcaggggcaaccggtgcaagtggccggcgcgccggcttccggcctg
gtgcgcatcaccgagggtgacgagcgaaaattcatcggcgttggtgacatcgccgaggac
ggtcgcgtggcgccgcgccgcctggtggtcgagcatttcgactga
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