Serratia marcescens SM39: SM39_5004
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Entry
SM39_5004 CDS
T03592
Symbol
radA
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
smar
Serratia marcescens SM39
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smar03400
]
SM39_5004 (radA)
DNA repair and recombination proteins [BR:
smar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SM39_5004 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
GvpD_P-loop
AAA_22
RecA_N
SLFN-g3_helicase
AAA_16
Rad51
AAA_14
nSTAND_NTPase5
NTPase_1
ABC_tran
AAA
nSTAND3
cobW
AAA_24
Zeta_toxin
AAA_5
AAA_29
Viral_helicase1
Zn_ribbon_Thio2
DZR
MMR_HSR1
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
BAO36899
UniProt:
A0AAT9F608
LinkDB
All DBs
Position
5203930..5205315
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AA seq
461 aa
AA seq
DB search
MAKAAKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPAAARNDRLSGYAGDAGV
SKVQKLSEISLEALPRFTTGFLEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQVLCKLS
EQMKTLYVTGEESLQQVAMRAHRLGLPTGGLNMLSETSIEQICLIAEQEQPKLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDHSMMSNPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVFV
NVVGGVKVSETSADLALLMSLVSSLRDRPLPNDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFKRAIVPHGNMPKKPPANMQVFGVKKLADALDVLEEFY
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagcggcaaaacgggcatttgtgtgcaatgagtgcggggcggactatccgcgt
tggcaggggcagtgcagcgcctgtcatgcctggaacaccatcacggaagtgcgtttggcc
gcgtcgcccgcagcggcgcgcaacgatcgcctcagcggctatgccggcgacgccggcgtc
agcaaggtgcagaagctgtcggaaatcagccttgaggcgctgccgcgcttcaccaccggc
tttctcgagttcgaccgtgtgctgggcggcggcgtggtgcccggcagcgccattctgatc
ggcggcaaccccggcgccggcaagagcaccctgttgctgcaggtgctgtgcaaactgtcc
gaacagatgaaaaccctgtacgtcaccggcgaggagtcgctgcagcaggtggcgatgcgc
gctcatcggctggggctgccgaccggcggcctgaacatgctgtcggaaaccagcatcgag
cagatctgcctgatcgccgagcaggaacagccgaagctgatggtgatcgactcgatccag
gtgatgcacatggcggacattcagtcttcgccgggcagcgtggctcaggtgcgcgaaacc
gccgcctacctgacgcgcttcgccaagacgcgcggcgtggcgatcgtcatggtcggccac
gtcaccaaagacggttcgctggccgggccgaaagtgttggaacactgcatcgactgttcg
gtgctgctggacggcgacgccgattctcgcttccgcaccctgcgcagccacaagaaccgc
ttcggcgcggtcaacgagctgggggtgttcgccatgaccgaacaggggctgcgcgaagtc
agcaacccttcggcgatcttcctcagccgcggcgatgaagtcacttccggcagttcggtg
atggtggtgtgggaaggcacccggccgctgctggtggagatccaggcgctggtggatcac
tcgatgatgtccaacccgcgccgcgtggcggtgggcctggagcagaaccggttggcgatc
ctgctggcggtgctgcaccggcacggcgggctgcagatgtcggatcaggacgtgttcgtc
aacgtggtcggcggggtgaaggtcagcgagaccagcgccgatctggcgctgctgatgtcg
ttggtgtcgagcctgcgcgatcggccgctgccgaacgatctggtggtgttcggtgaagtg
gggctggcgggagaaatccgtccggtgccgagcggccaggagcgcatctccgaagcggcc
aagcacggtttcaagcgcgccatcgtgccgcacggcaacatgccgaagaagccgccggcc
aacatgcaggtgtttggggtcaagaagctggcggacgcgctcgacgtgctggaagagttt
tattaa
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