Candidatus Sulfurimonas marisnigri: HUE87_00610
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Entry
HUE87_00610 CDS
T07564
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
smas
Candidatus Sulfurimonas marisnigri
Brite
KEGG Orthology (KO) [BR:
smas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smas03009
]
HUE87_00610 (dbpA)
Enzymes [BR:
smas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HUE87_00610 (dbpA)
Ribosome biogenesis [BR:
smas03009
]
Prokaryotic type
rRNA helicases
HUE87_00610 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
ERCC3_RAD25_C
Flavi_DEAD
CMS1
Helicase_RecD
P-loop_SecA
AAA_30
Cas3-like_C_2
Helicase_C_2
PRAI
vATP-synt_AC39
Pox_C7_F8A
adh_short
Motif
Other DBs
NCBI-ProteinID:
QOY54784
UniProt:
A0A7S7M205
LinkDB
All DBs
Position
119213..120583
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AA seq
456 aa
AA seq
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MNKTDFSNLPLSKEMLNNLNEIGYTEMTPVQAESLPFILEGRDVIAQAKTGSGKTAAFGI
GLLHKLQVKKFRVQTLILCPTRELADQVAKELRTLARFAHNVKILTLCGGSAFGPQLGSL
RHGAHIVVGTPGRILKHLKKETLSLENMDTLVLDEADRMLDMGFSEEINEVLGFAPKEKQ
TLLFSATYTDEIMNISATLQKDAVNVKTISTEIANSIVERFYEVQNSQKLDTLVNIFSTF
KPENVIVFANTKVEVQEIAETLQKKKIDALAIHGDLEQYERNDVLVQFANKSCPVLVATD
VAARGLDIKELSMVVNYDVPHGEETYTHRIGRTGRAGKEGLAFTLFTAYEADKAYEYKNE
TRLFEDAGELKAAVGFTMKPPYITLVIEGGKKDKVRAGDLLGALTGDAGLDGSSIGKIDI
YERQSYVAIESKKIDEAHDKLKNGKIKGKKFSVWIL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagatttttcaaaccttcctttatcgaaagagatgcttaataaccttaac
gaaatagggtacacagagatgactcctgttcaagcggagagtttgccttttattttagaa
gggagagatgtgattgcccaagctaaaacaggaagcggaaaaacagctgcttttgggatt
ggtttgcttcacaaacttcaagtaaaaaagtttagagttcagactcttatactctgtccg
actcgagagctagctgatcaggttgcaaaagagcttcgtacattggcgagatttgctcac
aatgtaaagattttaacattatgtggcggaagtgcttttggaccgcagcttggttcactt
cgtcatggcgcacacatagttgtaggaactcctgggagaattttaaagcatctaaaaaaa
gagacactttcccttgaaaatatggatacgcttgttcttgatgaagctgacagaatgtta
gacatgggctttagtgaagagataaatgaagttttagggtttgctccaaaagagaaacag
actcttcttttttcagctacttatacagatgaaattatgaacataagtgcaactttacaa
aaagatgctgtaaatgttaaaactatctctacagaaattgcaaacagtatagttgagaga
ttttatgaggttcaaaattctcaaaaactagatactttagtaaatattttcagcactttt
aaacctgaaaacgttatagtctttgcaaatacaaaagtagaagttcaagagatcgcagag
actctgcagaaaaagaaaattgatgcacttgcaattcacggcgatttagaacagtatgag
cgaaatgatgtgttagttcagtttgctaacaaaagctgtcctgtgttagtagcaactgat
gtagcagcaagaggacttgatataaaagagctctcaatggttgtaaactatgatgttcct
catggggaagagacttatactcaccgtattggtcgaacaggacgagctggaaaagagggc
ttggcttttacgctcttcacggcgtatgaggcagacaaagcatatgagtataaaaatgag
actcgtctttttgaggatgcgggtgagctaaaagctgctgttggctttacaatgaaacca
ccatatataacacttgttatagagggcggtaaaaaagacaaagttcgtgccggagattta
ctgggtgctttaacaggagacgccggacttgatggtagctcaatcggtaagatagatatt
tatgagagacaaagctacgtagcaattgaaagtaaaaaaatagacgaggctcatgataag
ctgaaaaatggaaaaatcaaaggtaaaaagttttcggtttggattctctaa
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