Candidatus Sulfurimonas marisnigri: HUE87_01605
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Entry
HUE87_01605 CDS
T07564
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
smas
Candidatus Sulfurimonas marisnigri
Pathway
smas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HUE87_01605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smas03400
]
HUE87_01605
Enzymes [BR:
smas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUE87_01605
DNA repair and recombination proteins [BR:
smas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HUE87_01605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
ResIII
Helicase_C
PriA_3primeBD
Zn_ribbon_PriA
nSTAND3
PhoH
AAA_19
AAA_7
Cas3-like_C_2
Pox_A32
AAA_25
zf-CHY
T2SSE
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QOY54967
UniProt:
A0A7S7M0S4
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Position
298438..300279
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AA seq
613 aa
AA seq
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MHYYNISLLNSPLEPFTYQSLLNLHVGTKVSLKVRNRLVDGVIVSTCNEPEFKTSEILEV
SDFKYSLEQMQLAKFISTYYFSSLGEAFGVMTPFSISQILLELDEETTLNITLSQKQQEA
LTFLKQHKTSLLFGDTGSGKTEIYMQYFYDVLKEKKRSIFLMPEISLTPQMGQRLEEHFG
DLVVMWHSKLTPKQKKIALQKIYDGTAYIIAGPRSALFLPVEELGLIVVDEEHDDSYKSS
SRPRYNARDIAIYMGKLYDVPVVLGSATPSLNSYTKFAHVRLKGGHFSSQKEFVYERSAE
KLSPLIFDSLSESLKAKEQAIVFLPTRANFKYLICQDCGHTYECVFCSVGMSIHQKSRAL
KCHYCNYSQAIPQVCCECGGGSLTSSRLGTAEAVKVIGEEFSEARVEQFDRDVITTSNKL
KKALKRFNDKESDILVGTQMLSKGHDYHGVTLAVVLGMDNMLNMGDYRAREKALSSLIQV
SGRSGRKQNAKVLVQTFNEEFFKTYIGSYENFLEEEKEYRKELYPPYKKLCRILFSHKNG
LKAQSEMNEMKEKLSKIQNIEIVGYGKCGVERVADKYRFEILLRSDKSTDIIKAIQACRV
GLAEIDMDPIEFG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
ttgcattattataatatttcacttttaaactctcctcttgagccatttacctaccaaagt
ttgctaaatctacatgtaggtacaaaagtcagtttaaaagtaagaaacaggttagttgat
ggtgttattgtctctacgtgtaatgagccagagtttaaaacaagtgaaattttagaagta
agtgattttaagtatagtttagagcagatgcagcttgctaaatttataagcacatactac
ttttcatctttgggtgaggcttttggggttatgacccctttttctatctcacaaatttta
cttgaattagacgaagagactactttaaatattactctttcacaaaaacaacaagaggca
cttacatttttaaaacaacataaaacctctcttctctttggtgataccggcagcggaaaa
acagagatatatatgcaatatttttatgacgttttaaaagagaaaaaacgctctattttt
cttatgcctgaaatctctttgactccgcagatggggcaaagattggaggaacactttggt
gacttagtggttatgtggcactcaaaactcactccaaaacaaaaaaagattgcactgcaa
aaaatttatgacggcactgcatatatcatagcaggtccccgttccgcactttttctccct
gttgaagagttaggtctgattgttgtagatgaagagcacgatgacagttataaatcatct
tcacgcccaagatacaacgccagagatatagccatatatatgggcaaactttatgacgta
cctgttgttttagggagtgcaacaccatctttaaactcttatacaaagtttgcacatgta
aggctcaaaggtggccacttcagctcacaaaaagagtttgtttatgagcgttcagcagaa
aagctatcccctttgatatttgacagtttaagtgagagtttaaaagcaaaagagcaggct
atagtttttctcccgacccgtgcaaattttaagtatcttatttgtcaagattgcggacac
acttatgagtgtgtgttttgcagtgttggtatgagtattcaccaaaaaagcagagcactg
aagtgccactactgcaactattcacaagctatacctcaagtgtgctgtgagtgtggtggc
ggttcacttacgagtagcagacttggaactgccgaggcagtcaaggtgattggcgaagag
ttttctgaggctagggttgagcagtttgacagagatgttataaccacttcaaacaaactg
aaaaaagcactaaaacgtttcaatgacaaagagagcgatatacttgtaggaactcagatg
ctaagtaaggggcatgactatcatggagttactttggcagttgttcttgggatggacaat
atgctaaatatgggtgactacagagcaagagagaaggctttgtcatctctaatacaagtc
tcgggcagaagcgggagaaagcaaaatgccaaagttttagttcaaacttttaatgaagag
ttttttaaaacttacataggcagttatgagaattttttagaagaggaaaaagagtacaga
aaagagctctatcctccatataagaaactttgccgcatccttttttctcataagaacgga
ctaaaagctcaaagcgaaatgaatgaaatgaaagagaaactatctaaaatacaaaatatt
gagatagtaggttatggaaaatgtggagtagagagagtagctgataagtataggtttgag
atacttctgcgctctgataagagtacagatataataaaagcaatacaagcttgcagagta
gggcttgcggaaatagatatggatcctattgaatttggatag
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