Candidatus Sulfurimonas marisnigri: HUE87_01945
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Entry
HUE87_01945 CDS
T07564
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smas
Candidatus Sulfurimonas marisnigri
Pathway
smas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUE87_01945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smas03019
]
HUE87_01945
03016 Transfer RNA biogenesis [BR:
smas03016
]
HUE87_01945
Enzymes [BR:
smas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HUE87_01945
Messenger RNA biogenesis [BR:
smas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HUE87_01945
Transfer RNA biogenesis [BR:
smas03016
]
Prokaryotic type
tRNA degradation factors
HUE87_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QOY55031
UniProt:
A0A7S7RQT8
LinkDB
All DBs
Position
375516..377681
Genome browser
AA seq
721 aa
AA seq
DB search
MKYDVKVELLNAEQEYNFSDIAKQANGSAWVKSGDSVILATVVIDETEIVKDDFLPLTVQ
YIEKTYAAGKIPGGFFKRETKPSDFETLTSRIVDRSLRPLFPKGFGHPTQITILVLSADK
ECDLQVLALNAASAALYISDIDINTSVSAVRAAKVDGEIVLSPTLQQLKNSTLDLYLSGT
KEDILMIEMRSIGSEKFDNTLVVDPLMDPTMSAPILSTRTSNAISEDELIKVFEQTQRVL
FENNTKLEDSFKPFKKDTLAIEYKAHVINEEMVSFVKDNHMSDIKDAMNQMAKSERSTAL
RQLRKRIIKNNIEWEEIELKDAIEKVKKEQVRAQILNDRTRADGRSLTEVRPISISTNVL
PSAHSSCLFTRGQTQALVVLTMGGPKDAQMFEALTDEGTQNENFMVHYNFPGFSVGEASP
IMGTKRRELGHGNLAKRALEPIINLDGQTVRLVSEILESNGSSSMATVCGGYMALRAADV
ETSDVVAGIAMGMVSKGEKYAILSDIMGLEDHDGDMDFKVTGSKDGITAMQMDIKLGGIS
LDVLKEALYQAKEGRSHIIDIMIDAEEKIEFNDGVLPSTDFFHIDPSFIGEIIGQAGKTI
REMIEKFEVAIDIDKKDGKVKITGKNKTGVAGAREHINGIVNAPKVEKVKYEVGEKYEGT
VKKIVDFGAFIELPDGTDGLLHISKVSDQRVEKVSDVLSEGEKITVEILEFKGNKISLGR
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatgatgtaaaagtagagcttttaaatgcagagcaagagtataattttagtgat
atagcaaagcaggcaaatggctctgcatgggtaaaaagtggtgatagtgtaatacttgct
acagttgttattgatgagacagagattgtaaaagatgattttttgccactaactgttcag
tatatagaaaaaacatatgcagctggtaaaattcctggtggattttttaaacgtgagact
aaaccgagtgattttgaaacacttacttctcgtatagttgatcgctcactccgtccacta
ttcccaaaaggctttggacacccaacgcagataactattttagtattaagtgctgataaa
gagtgtgatttacaggttctagcacttaatgctgcgtcagctgcactatatattagtgac
atagatataaatacttctgtatctgcagttcgtgctgctaaagttgatggagaaatagtt
ttaagtccaactctgcaacagctaaaaaattctactctagatctatatctatctgggact
aaagaagatattcttatgattgagatgagatctattggttcagagaaatttgataacact
ttggttgttgacccactaatggatccaacgatgagcgctcctatattatcaactcgtact
tcaaatgctataagtgaagatgaacttataaaggtttttgagcaaactcagagggtactt
tttgagaataatactaagcttgaagactcttttaaaccttttaaaaaagacacattagca
attgagtacaaagcacatgtaatcaatgaagagatggtttcatttgtaaaagataatcac
atgtcagatattaaagatgctatgaatcaaatggcaaaatcagaacgctcaacagctcta
agacaacttagaaaaagaataataaagaacaatattgagtgggaagagatagagctaaaa
gatgcaatagaaaaagtaaaaaaagagcaagttagagctcaaattttaaatgatagaact
cgtgcagatggaagatctttaactgaagtaagacctatctctattagtacaaatgtactc
ccttctgctcactcatcatgtctgtttacacgtggacaaacgcaagcattagttgttctc
acaatgggcggacctaaagatgcacagatgtttgaggccttgacagatgagggaacacaa
aatgaaaactttatggttcactataattttcctggttttagtgttggtgaagcatctcct
attatgggaacaaaaagaagagaactagggcatggaaatttagctaaaagagcacttgag
cctattataaatctcgatggacaaacagttcgtttagtttctgaaatactggaatcaaat
ggttcatcttcaatggcaacagtttgtggagggtatatggcacttcgcgctgcggatgtt
gagactagtgatgtagtagctggaattgctatgggtatggtttccaaaggtgaaaaatat
gccattctttctgacattatgggcttagaagatcatgatggtgatatggactttaaggtt
actggttcaaaagatggaattactgcaatgcagatggatattaaactcggcgggattagt
ttagatgttttaaaagaagcactttaccaagccaaagagggtagaagtcatattatagac
ataatgatagacgctgaagaaaaaatagaatttaatgacggggttcttcctagtacagac
ttctttcacatagaccctagctttataggcgagattattggtcaagcaggtaaaactatt
cgtgaaatgatagagaagtttgaagtggcgattgatatcgataaaaaagatggaaaagtt
aaaataacaggcaaaaataaaacgggagttgctggagctagagaacatataaatggcata
gtaaatgcaccaaaggttgaaaaagttaaatatgaagttggcgaaaaatatgaaggaact
gtaaaaaagatagttgattttggagcctttatagaacttccagatggaacagacggactt
ttacatatctcaaaagtctcagaccaaagagtggagaaagtatcggatgtattaagtgaa
ggtgaaaaaataacagttgagatattggaatttaaaggaaataaaatttctttaggccgc
gcgtaa
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