Candidatus Sulfurimonas marisnigri: HUE87_04565
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Entry
HUE87_04565 CDS
T07564
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smas
Candidatus Sulfurimonas marisnigri
Pathway
smas03420
Nucleotide excision repair
smas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUE87_04565
03430 Mismatch repair
HUE87_04565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smas03400
]
HUE87_04565
Enzymes [BR:
smas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUE87_04565
DNA repair and recombination proteins [BR:
smas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUE87_04565
MMR (mismatch excision repair)
Other MMR factors
HUE87_04565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
ResIII
DEAD
Pan_kinase
Motif
Other DBs
NCBI-ProteinID:
QOY55512
UniProt:
A0A7S7RQK1
LinkDB
All DBs
Position
898100..900184
Genome browser
AA seq
694 aa
AA seq
DB search
MPLSRLNQEQYAAATSAESQNLIIASAGTGKTSTIVGRIGHLLGSGVKPQEILLLTFTNK
AAAEMVSRVAEYFGKDVASKIDAGTFHAVSYRWLKKQDKKVVLKQQRELKTLFRSVFEKR
SFDHIGAEITPYGGNYLYDLYSFYQNTELENSFDNWVINKYPEHELFAMIYADIVDEFEK
LKKEYGFVNFNDLLLNFREICKTKDLGYKEVLVDEYQDTNALQGTLIEAIKPPSLFCVGD
YDQSIYAFNGADISIIGSFATKFPNAIVHTLTKNYRSTMPILSLATKVINHNERIYEKKL
EVTRAQEAQAPRLLAYDELFDQYHAMAAQIRDSQTPREEIAVIFRNNSSADGIEVGLREL
GIPCKRKGGTSFFDSREVKAVLDFYTLLVNESDMMSFIHIFEFARGIGSAMAKEIYIALK
TLGHGSIFYGLYAPDESIKNPFEKRKLNHQLGLFDDFIELGAVGKFAKLGFEAKFMKNPI
LKHPKLTKDSATFLHDFYLLYRDLKGIKQPRTIVKKIAASAVYTYISEILSSKRAQLKDG
TIDEKQKTESLSKISRKMILLEELSKPYSEHERFLNAMILGSSDLTQGEGVNLLSVHASK
GLEYKEVYVIDLMDGRFPNRKLMQRGGSLDEERRLFYVAVTRAKDILFLSYAKYDKIKKT
NFVPSQFLYEAGLVPKDEAYRALIEKEMEKEEED
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
ttgccactttctcgtcttaaccaagagcagtatgctgccgcaacttctgcagaatcacaa
aacctaattattgcatctgctggaactggtaaaacatctacaattgttggacgaattggg
caccttttgggttcaggtgttaaaccgcaagagattttacttctcacatttacaaataaa
gctgccgcagagatggtttcgcgtgtagcggagtattttggtaaagacgtagcctctaaa
atagacgcagggacttttcatgctgttagttatagatggctaaaaaagcaggataaaaaa
gtagttttaaagcaacaaagagagctgaaaacactttttagaagcgtgtttgaaaagcgt
tcctttgatcatattggtgctgagataactccttacggtgggaactatctttatgattta
tactctttttatcaaaatacagagttagagaacagttttgataattgggttataaataaa
taccctgagcatgagctgtttgccatgatttatgcagatatagtagatgaatttgaaaag
ttaaaaaaagagtatggatttgttaattttaatgacttgcttctaaattttagagagatt
tgcaaaactaaagatctcggctataaagaggtgcttgtagatgaatatcaagatacaaat
gcacttcaagggacactaatagaggcaataaaaccgccatcacttttttgtgttggggac
tatgaccaaagtatttatgcttttaatggtgctgatatatcaataatcggttcattcgct
acaaagtttccaaatgcaatagttcatacacttacaaaaaattatcgctccacaatgccg
attctttcacttgcaacaaaagttataaatcataatgaaagaatatatgagaaaaaacta
gaggtaacaagagctcaagaggcacaagctccaaggcttttggcttatgatgaactattt
gaccagtaccatgcaatggcagcgcagataagagacagccagactccaagagaggagata
gcggttatatttagaaacaactcttctgccgatggtattgaagttggtcttagagagctt
ggaattccatgtaagagaaaaggggggacaagtttttttgactcacgagaggttaaagct
gttcttgatttttatacactgcttgtaaatgagtcagatatgatgtcctttattcatata
tttgaatttgctcggggaattggaagtgcaatggcaaaagagatttatattgcgctaaag
actttaggtcacggaagtattttttatggtctatatgcacctgatgaatcaattaaaaat
ccttttgaaaaacgaaagttaaatcatcagcttggtctttttgatgactttatagaacta
ggagctgttgggaaatttgcaaagcttgggtttgaagcaaagtttatgaaaaatccaatt
ttaaaacatccaaaacttacaaaagattcggctacatttttacatgatttttatcttttg
tatcgtgatttaaaaggtataaagcaaccaagaactattgtgaaaaaaatagctgcctct
gccgtttatacatatatatctgaaatattatctagcaaaagagcacagcttaaagatggc
actatagacgaaaaacaaaaaacagaatcactctctaaaataagcagaaaaatgattctt
ttagaggaactctcaaaaccatactctgagcatgagagatttttgaatgctatgatttta
ggatcatctgacctaacgcaaggtgagggtgtaaacctgctgagcgttcatgcttctaaa
gggttggaatataaagaggtatatgtaattgatttgatggatggaagatttccaaacaga
aaacttatgcaaagaggtggctcactcgatgaagagagacgtctcttttatgttgcagtg
actagagccaaagatatactttttttgagctatgcaaaatatgacaaaatcaaaaagaca
aactttgtaccatcccaatttttgtatgaagctggcttagttccaaaagatgaagcgtac
agagctttaattgaaaaagagatggaaaaagaggaggaagactaa
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