Candidatus Sulfurimonas marisnigri: HUE87_09770
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Entry
HUE87_09770 CDS
T07564
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
smas
Candidatus Sulfurimonas marisnigri
Pathway
smas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUE87_09770 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smas03021
]
HUE87_09770 (rho)
03019 Messenger RNA biogenesis [BR:
smas03019
]
HUE87_09770 (rho)
Transcription machinery [BR:
smas03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HUE87_09770 (rho)
Messenger RNA biogenesis [BR:
smas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HUE87_09770 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
ATPase_2
AAA
OB_RNB
OB_RNR_1st
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QOY54163
UniProt:
A0A7S7RQ45
LinkDB
All DBs
Position
1929306..1930658
Genome browser
AA seq
450 aa
AA seq
DB search
MSENNSEQPRKSNPKSSPKNNSKQRTHKPVKGASVEELRIKSIDELTALAIELNVENPNE
LKRQDIIFEILKAQTEQGGFILFSGILEIMQDGYGFIRSIDKSFNESINDAYVSNTQIKR
FALRNGDVVTGQVRPPKDQERYYALIKIEAVNSLPPEESKKRPLFENLTPLYALDQIKLE
YREKGLTGRMLDLFSPIGKGQRALIVAPPRSGKTELLKEIAHGITHNHAEIDLMVLLVDE
RPEEVTDMERSVKGEVYSSTFDMPAKNHVKVAEMVIEKAKRRVELGKDVVILLDSITRLA
RAYNTVTPSSGKVLSGGVDANALHRPKRFFGAARNIENGGSLTIIATALVDTGSKMDEVI
FEEFKGTGNSEVVLDRKIADRRIFPAIDILKSGTRKDELLIGPEVLQKVFILRQMIHKQE
NEIEALKFVYATMGKKATNDEFLESMNTNS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaacaattcagaacaaccgcgtaaatctaaccctaaatctagccctaagaac
aattcaaagcaaagaactcacaaaccagtaaaaggtgcaagtgttgaagagctccgtatt
aagagtattgatgagttaacggctttagcaatagagttaaatgttgaaaaccccaacgaa
cttaagcgtcaagatattatctttgaaattctaaaagcacaaactgaacaaggtggcttt
atcctttttagtggaattcttgaaattatgcaagatggctacggatttatccgctcaata
gacaaaagttttaacgaaagtataaatgatgcttatgtttccaatacacagattaaaaga
tttgctcttagaaacggtgatgtcgttacaggtcaagttagaccgccaaaagaccaagag
agatactacgctcttattaaaatcgaagcagtaaattcacttccacctgaagagagcaaa
aaaagacctctgtttgaaaatcttacaccactttacgcactagaccaaataaaactagag
tatagagaaaaaggtctaaccggccgcatgctggatctcttttcccctattggtaaaggt
cagcgtgctcttatagttgcacctcctagaagcggtaaaactgaactcttaaaggaaatt
gctcatggtataactcataaccatgcagagattgacctaatggttttacttgttgatgag
agacctgaagaggttacagatatggagagaagcgttaaaggtgaagtttatagctcaact
tttgatatgcctgcaaaaaaccatgtaaaagttgccgagatggtaatagaaaaagcaaaa
agacgtgttgaactaggtaaagacgttgttattttacttgactccatcacccgtctggca
cgtgcatacaatactgttacaccttcaagcggaaaagttctgagcggtggtgttgatgca
aatgcgcttcacagaccaaaacgtttttttggagctgcccgcaacattgaaaatggagga
agcttaactatcattgcaactgcccttgttgatacaggtagcaaaatggatgaagttatc
tttgaagagttcaaaggtacgggtaattcagaggttgttcttgatagaaaaattgccgac
agaagaatattccctgcaattgatatcctcaaatccggaacacgtaaagatgaacttctt
atcggccctgaagttctacaaaaagtatttattcttcgccagatgatacataaacaagag
aatgaaattgaagcacttaaatttgtttacgcaactatgggtaaaaaagctacaaatgat
gaattcctagaaagcatgaatacaaactcgtaa
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