Candidatus Sulfurimonas marisnigri: HUE87_10500
Help
Entry
HUE87_10500 CDS
T07564
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
smas
Candidatus Sulfurimonas marisnigri
Pathway
smas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUE87_10500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smas03019
]
HUE87_10500
03009 Ribosome biogenesis [BR:
smas03009
]
HUE87_10500
Enzymes [BR:
smas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HUE87_10500
Messenger RNA biogenesis [BR:
smas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUE87_10500
Ribosome biogenesis [BR:
smas03009
]
Prokaryotic type
rRNA helicases
HUE87_10500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QOY54295
UniProt:
A0A7S7LZF7
LinkDB
All DBs
Position
2076185..2077786
Genome browser
AA seq
533 aa
AA seq
DB search
MQENAQTVEQTNEEPTITFDDLGLNKDILRAVKDAGFTVPSPIQASAIPFVLAGRDIVGQ
AHTGTGKTAAFGLPALNNIDPKNGVGILIITPTRELATQVSDEMFKYGRNIGARTVTVYG
GSSYNRQIDLIERGAAVVVATPGRLLDILKKNLLKDFAPSIVVLDEADEMLDMGFLDDIN
EIFSYLPTNRQTLLFSATMPKPIRLLAERILDNPEFISITKGETTNTDIEQEYYVIEESE
RDDAIIRLMDAEETKKCVVFCRTKSEVDRLSNVLSNAGYLANGLHGDMEQRQRETVIKGF
KQNSVKVLVATDVAARGIHVDNISHVFNYHIPFDPESYVHRIGRTGRAGTKGKAITLLTP
LEFKELQRIKAKVGTTMTHAFVPSKNDLRALNLKSIVKTIEDQHIYDEAHQILDMLKEDI
DEATIMFKLVSMILDRQAVKGPNTIGIPADKLAAILERAANRNDSRGGRGGYKGNRNRSG
GGGDRNRSGSGDRNRSGGGGGYRGGNSSGGSSAGGGDRSRSGGGDRNRNRTRD
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaatgcacaaacagtagaacaaactaatgaagagccaacaatcacatttgat
gatttaggtttaaacaaagatatacttagagcagttaaagacgcaggttttacagttcca
agccctattcaagcatcagcaataccattcgtattagctggtcgtgacatagttggtcaa
gcacacactggtactggtaaaacagcagcttttggtcttccggcactaaacaatattgat
cctaaaaatggtgttggtatactaattatcactccaactcgtgaacttgctactcaagtt
agtgatgagatgtttaagtatggtagaaatataggcgctagaacagtaactgtttatggc
ggtagctcttataatagacaaattgaccttattgaaagaggtgcagcagttgttgttgca
actccaggtcgtcttttagacatacttaaaaagaatttacttaaagatttcgctcctagt
atcgttgtacttgacgaagcggatgagatgcttgatatgggatttttagatgatattaat
gaaatattctcttaccttccaacaaatcgtcaaacacttcttttctctgcaactatgcct
aagcctattaggcttctagctgagagaatattagacaatccagagttcatctctattact
aaaggtgaaactacaaacacagatattgagcaagaatactatgtaatcgaagagtctgaa
agagatgatgctatcatccgtctaatggatgctgaagagactaaaaaatgtgtagtgttt
tgtagaacaaaaagcgaagtagatcgtctttcaaatgttctttcaaatgctggatactta
gctaatggtcttcatggagatatggagcaacgccaacgtgagactgtaatcaaaggtttc
aaacaaaattcagtaaaagtacttgttgctactgatgtagccgctcgtggtatacatgta
gataatatctctcatgttttcaactaccatattccttttgaccctgagtcttatgttcac
cgtattggtagaactggtcgtgcgggaactaaaggtaaagctattacacttttaactcct
ctagagtttaaagaactacaaagaataaaagcaaaagttggaactacaatgactcatgca
tttgttccaagtaaaaatgatttaagagctttaaacttaaaatcaatagtaaaaacaatt
gaagaccaacacatctatgatgaagctcatcaaattcttgacatgttaaaagaagatata
gacgaagctactattatgtttaaactagtttcaatgattcttgatagacaggcagttaaa
ggtccaaatactatcggtatccctgctgataagttagctgctattttagagcgtgctgct
aatagaaatgatagcagaggtggccgtggtggttacaaaggaaatagaaatcgttcaggt
ggcggtggagatagaaatcgtagcggtagcggtgacagaaatcgttcaggtggcggcggt
ggataccgtggtggaaactctagtggtggaagttctgctggcggcggagacagaagtcgt
tctggtggcggtgatagaaaccgtaacagaactagagactaa
DBGET
integrated database retrieval system
