Candidatus Sulfurimonas marisnigri: HUE87_11990
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Entry
HUE87_11990 CDS
T07564
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smas
Candidatus Sulfurimonas marisnigri
Brite
KEGG Orthology (KO) [BR:
smas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smas03032
]
HUE87_11990 (topA)
03400 DNA repair and recombination proteins [BR:
smas03400
]
HUE87_11990 (topA)
Enzymes [BR:
smas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HUE87_11990 (topA)
DNA replication proteins [BR:
smas03032
]
Prokaryotic type
DNA Topoisomerases
HUE87_11990 (topA)
DNA repair and recombination proteins [BR:
smas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUE87_11990 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF7129
Zn_ribbon_RPB9
Zn_ribbon_19
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QOY54565
UniProt:
A0A7S7LZY5
LinkDB
All DBs
Position
2369945..2372185
Genome browser
AA seq
746 aa
AA seq
DB search
MNLIIVESPAKAKTIKNFLGKEYEVIASKGHIRDLPKSRFGITVEEETQHLVPAYSVAKE
NSAIVKEIKALAKKADTIYIATDEDREGEAIGWHIAHAIKKDPEELPRIVFHEITETAIK
HALENARKIDMDMVNAQQARRMLDRVVGYKLSPLLASKIQKGLSGGRVQSSTLKLVVDRE
REIKAFIPVEYWTIDTLFKKDIEATLTTHMGVKLSKMSIEDKDDAEAIEKSVKADSFTIS
KIETKTRNSKTPPPFMTSTLQQTASSKLGFTPKKTMMVAQALYEGVKTPSGTSGVITYMR
TDSLNLAHEAVTGVRGVIESRFGAKYLPKEPKVYNKKSKGAQEAHEAIRPTMLQFTPEVA
SSFLKADEIKLYRLIYERFMSCQMEDAVFEQQSIIFTGKESEYRASGRKLTFDGFYALTG
AEDKDKLLPTLVEGDKADIQSIKPEQHFTEPPARYSEAALIKKLESEGVGRPSTYAPTIA
TLSGRTYVTIEKKQIIPTEIAFTVTDMLEKNFANIVDISFTANMEEKLDEVAEGNSNWQE
LLSEFYFPFMEQVAEGKEKIVSLKLAKPLGRACPKCGEELLLRSGRFGNFVACSGFPACK
YTEQVDADGNKVEVVVETSDVKCEKCGKDMIVKNGRNGQFLACSDYPDCKNTKSISVEEK
TSETPCPDCGGKISLKNSRRGPFWGCENYPDCKFISKFEPTKIKCEEKGCNGLLAERTYR
KKEVYECVKCKARTPREEETKEESKE
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
ttgaacttaattatcgtcgaatcaccagctaaagctaaaactatcaaaaacttccttggc
aaggagtatgaggttatcgcatccaaaggacatatacgagatttacctaagtctcgcttt
ggaataaccgtagaagaagagactcaacatcttgtaccggcctacagtgttgcaaaagag
aactctgccattgtaaaagagattaaagcgcttgcaaagaaagctgatacgatatatatc
gcgaccgatgaggatcgtgagggtgaggctataggatggcatattgcccatgctataaaa
aaagatcctgaggaacttcctcgtatagtttttcatgaaattacagagactgcgataaaa
catgcacttgaaaatgctcgtaagatagatatggatatggtaaatgcacaacaagctcgt
cgtatgcttgaccgtgttgttggttataaactatcgcctctactagcttcaaaaattcaa
aaaggtctttcaggtggtcgtgttcaatcttcaacccttaaacttgtagttgaccgtgaa
agggagataaaagcatttatcccagttgaatactggactatagatacgctgtttaaaaaa
gacattgaagcaactcttacaacacatatgggtgttaaattatcaaaaatgtctatagag
gacaaagatgatgcagaggctatagagaaaagtgttaaagcagatagttttacaatctct
aaaatagagactaaaacaagaaatagcaaaaccccaccaccatttatgacttcaactcta
caacaaactgcttcatctaaattaggatttactcctaaaaagactatgatggtagcacag
gcactttacgagggtgtaaaaactcctagtggaacttctggtgttattacatatatgaga
acagactcattaaaccttgcccatgaagctgtaactggtgttcgtggtgtaatagagagt
agatttggtgcaaaatacctgccaaaagagccaaaggtttataacaaaaaatctaaaggt
gctcaagaggctcacgaagctatccgtccgacaatgctacagtttactccagaggttgcg
tcatcatttttaaaagctgatgagattaaactttaccgtctaatttatgagagatttatg
tcttgccaaatggaagatgctgtatttgagcaacaaagtataatttttactggtaaagag
agtgaatatagagcaagtggtagaaaacttacttttgatggcttttatgcactaactgga
gctgaagataaagataaacttcttccaacattagtagagggtgataaagctgatatacaa
agtatcaagcctgagcaacatttcactgagccaccggcaaggtattctgaggctgcacta
attaaaaaactagagagtgaaggtgtaggacgtccttctacctatgctccaactattgcg
acacttagtggtcgtacttatgtaactattgagaaaaaacaaattattccaactgagatt
gcatttactgtaactgatatgctggagaaaaactttgctaacatagttgacatctctttt
acagccaacatggaggagaaacttgatgaagttgcagagggaaatagcaactggcaagaa
cttttaagtgaattttactttccttttatggaacaggtggctgaaggtaaagagaagatt
gtttctttaaaacttgctaagcctcttggcagagcttgtcctaaatgtggcgaagagtta
cttcttcgatctggtagattcggaaattttgttgcatgtagcggctttcctgcatgtaaa
tacacggagcaagttgatgcagatggaaataaagtagaagtagtagttgagactagtgat
gtaaagtgtgaaaaatgtggcaaagatatgattgtgaaaaatggtagaaatggccaattt
ttagcatgtagtgattatcctgattgtaaaaatactaagagtataagtgttgaagaaaaa
acttctgaaactccttgccctgactgtggtggtaaaataagtcttaaaaattctcgtcgt
ggtcctttttggggatgtgagaattatcctgattgtaaatttatatccaaattcgaacca
acaaaaataaaatgtgaagaaaaagggtgtaatggtctcttagctgaaagaacttataga
aaaaaagaagtttatgagtgtgttaaatgtaaagctagaacaccaagagaagaagaaacg
aaagaagagagtaaagaatag
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