Candidatus Sulfurimonas marisnigri: HUE87_12160
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Entry
HUE87_12160 CDS
T07564
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
smas
Candidatus Sulfurimonas marisnigri
Brite
KEGG Orthology (KO) [BR:
smas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smas03019
]
HUE87_12160
03009 Ribosome biogenesis [BR:
smas03009
]
HUE87_12160
03036 Chromosome and associated proteins [BR:
smas03036
]
HUE87_12160
Enzymes [BR:
smas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HUE87_12160
Messenger RNA biogenesis [BR:
smas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HUE87_12160
Ribosome biogenesis [BR:
smas03009
]
Eukaryotic type
90S particles
RNase
HUE87_12160
Prokaryotic type
rRNA processing factors
HUE87_12160
Chromosome and associated proteins [BR:
smas03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HUE87_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QOY54597
UniProt:
A0A7S7RPN8
LinkDB
All DBs
Position
complement(2399086..2399763)
Genome browser
AA seq
225 aa
AA seq
DB search
MNKNIDILEKTLGYKFKKEKLIIEALTHKSYKQPYDNERLEFLGDAVLDLIVGEYLFNKF
PQSDEGKLSKIRASLVNESGFDMLARSINLGEYIYLSNAEENNGGREKASLLSNAFEAII
GAIYLEAGLKVVEKIAISIIEKNHKDISLDSLFKDFKTTLQELTQARFGQIPDYQVIASR
GPDHKKEFEVAVIIEEKEYARAMGKSKKIAQQEAAKMAVEMLKEK
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatatagatattctagagaaaactttaggatacaagtttaaaaaagaaaag
ctcattatcgaagcgctgacacataaaagttataaacagccctacgataatgagcgacta
gagtttttgggtgatgcagttttggatttgattgttggagagtatttgtttaataaattc
ccacaatcagatgaaggaaaactctcaaagattagagcgtctttggtgaatgagagcgga
tttgatatgcttgcgcgctccattaatcttggagagtatatttacctgtcaaatgctgaa
gagaataatgggggaagagaaaaggcatctctattatcaaatgcttttgaagctattatt
ggtgcaatttatcttgaagctgggctgaaagtagttgaaaaaattgctatatctattata
gaaaaaaatcataaagatatatcattggactcactttttaaagattttaaaactactctt
caggagttgacacaggcaagatttgggcaaatacctgattatcaggttatagccagtcgc
ggacctgaccacaaaaaagagtttgaagtagctgtaatcatagaagaaaaagagtatgca
agagccatggggaaaagtaaaaagattgctcagcaagaggctgctaaaatggcagtagag
atgttaaaggaaaaatag
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