KEGG   Sphingomicrobium maritimum: WJT74_00120
Entry
WJT74_00120       CDS       T11086                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
smat  Sphingomicrobium maritimum
Brite
KEGG Orthology (KO) [BR:smat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smat03400]
    WJT74_00120
Enzymes [BR:smat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     WJT74_00120
    5.6.2.6  RNA 3'-5' helicase
     WJT74_00120
DNA repair and recombination proteins [BR:smat03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    WJT74_00120
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: XAM22848
LinkDB
Position
complement(28714..31128)
AA seq 804 aa
MSAKLPDTVTDWFAARGWRLRTHQSGMLDASYTGEHALLVAATGAGKTLAGFLPSIVDLI
ERPSEGLHTLYVSPLKALAVDVQRNLLTPIEEMGLPIRVETRSGDTPSNRKVRQRTKPPQ
MLLTTPESLSLLLSYPDADRMFGNLKTIIVDEVHAFAKEKRGDLLSLAMARLTKLSPGVR
RVGLSATIADPDAYRAWLAPYGDIETVRLVEGEPGAPADLSILIPEERVPWSGHSGRYAA
SQVLGLIEQHGASIIFCNTRSLCELIFQDLWSANDNQLPIGVHHGSLSKEARRRVELAMA
EGRLRGLVATASLDMGLDWGNVDLVAQMGAPKGSSRLLQRVGRANHRLNEPSKGMIVPGN
RFEYLEARACLDAIDDGELDPEDFRPGTLDVLAQHVMGIACAGPFDSAELLDEVRSAAPY
SGLTEEVWERILHLNSTGGYALKAYDKYQRLTEDAPGQWRITKPVVAQKHRLNAGVIVDN
VMMDVRFRNGRKIGRVEETFGATLKPGDAFYFSGISVEVESFKETDIVVRASTKKGRIVS
YGGQRMSMSTHLARRVRGFLADRSQWSRFPDDVNEWLDVQSRRSVLPEPHELLVETFPHE
GRHFMVAYSFDGWNAHQSLGMLLTARMDRAGMKPLNWVANDYAIAVSSLEPVTDPQALFS
ADILEDEFREWVEESHLLKRAFREVAVIGGLVERQHPGQRKTGKQVSFSTDLIYDVLKKY
EPDHLLMRAAWDDARARMTELGRLVRLVERASDTMVHVQASRVTPMAVPLMVVIGREQAP
GGAADEALLIEAEQALIDEAMRLD
NT seq 2415 nt   +upstreamnt  +downstreamnt
ctgagcgccaagcttcccgacactgtaacggattggttcgcggcacgtggctggcggctg
cggacgcaccagtccggcatgttggacgcgtcctacaccggcgagcatgccctgctcgtc
gccgcgaccggcgcgggcaagacgctcgcgggattcctgcccagcatcgtcgacctgatc
gagcggccgagcgagggactgcatactctctacgtctccccgctaaaggcgctggcggtc
gatgtgcagcgcaacctgctgaccccgatcgaggagatggggctgccgatccgtgtcgag
acccgctccggcgacacgccgtccaaccgcaaggtgcgccagcgcaccaagccgccccag
atgctgctgacgacgcccgaaagcctctcgcttttgctgtcctatcccgacgccgaccgg
atgttcggcaatctgaagacgatcatcgtcgacgaggtccacgccttcgcgaaggagaag
cgcggcgacctcctcagcctcgcgatggctcggttgacgaaactgtcgccgggcgtgcgc
cgagtgggcctcagcgcgacgatcgccgatcccgacgcctaccgcgcgtggcttgcgccc
tatggcgacatcgagacggtgcggctggtggaaggagaaccgggagcgcccgcggacctg
tcgatcctgatccccgaggaacgggtgccgtggtcgggccattcgggccgctacgccgcc
agccaggtgctgggcctgatcgaacagcacggcgcgagcatcatcttctgcaatacccgc
agcctgtgcgaactgatcttccaggacctgtggagcgccaacgacaaccagctgcccatc
ggcgtccaccacggcagcctgtccaaggaagcgcggcgcagggtcgaactggcgatggcc
gaggggcggctgcgcgggctggtggcgacggcaagcctcgacatgggcctcgactggggc
aacgtcgatctggtcgcgcagatgggcgcgcccaaggggtcgagccggctgctccagcgc
gtcggtcgcgccaaccaccgactgaacgagccgtcgaagggcatgatcgtgcccggcaac
cgcttcgaatatctggaagcgcgcgcctgtctcgacgcgatcgacgacggcgaactggac
cccgaggatttccgccccgggacgctcgacgtgctggcgcagcacgtgatgggcatcgcc
tgcgcgggcccgttcgacagcgccgaactgctcgacgaggttcgctcggcggcgccctat
tcggggctgacggaagaggtgtgggagcgcatcctgcacctcaattcgaccggcggctat
gcgctcaaggcctacgacaagtatcagcggttgaccgaggacgcgcccggtcaatggcgc
atcaccaagcccgtcgtggcgcagaagcaccggctcaatgcgggcgtcatcgtcgacaat
gtcatgatggacgtccgcttccgcaacggacgcaagatcgggcgggtcgaggagacgttc
ggcgcgacgctcaagcccggcgacgccttctatttctcgggtatcagcgtggaggtcgag
agcttcaaggaaaccgacatcgtcgtgcgcgcttcgaccaagaaggggcggatcgtcagc
tacggcggccagcggatgagcatgtcgacgcatcttgcgcggcgggtgcgcggcttcctg
gccgaccggtcgcaatggtcgcgtttccccgacgacgtgaacgagtggctcgacgtccag
tcgcgccggtcggtgctgcccgaaccgcacgaactgctggtcgagacctttccgcacgaa
gggcggcatttcatggtcgcctacagcttcgacggatggaacgcgcaccagagcctcggc
atgctgctgaccgcgcggatggaccgggcggggatgaagccgctcaattgggtcgccaac
gattatgccatcgcggtatcgagcctcgaaccggtgaccgatccgcaggccttgttctcc
gccgacatcctcgaggacgagtttcgcgaatgggtcgaggaatcgcatctgctcaagcgc
gcgttccgcgaggtggcggtgatcggcgggctggtcgagcggcagcatccgggacagcgc
aagactggcaagcaggtcagcttctcgaccgacctcatctacgacgtgctcaagaaatac
gagcccgatcatctgctgatgcgcgcggcgtgggacgatgcgcgggcgcggatgaccgaa
ctggggcggctggttcgcctcgtcgagcgggcgagcgacacgatggtccatgtgcaggcc
agccgcgtcaccccgatggcggtgccgttgatggtcgtcatcggccgcgaacaggcgccc
ggcggcgcggccgacgaggcgctgctgatcgaggcggagcaggcgctgatcgacgaggcg
atgcggctcgactag

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