Sphingomicrobium maritimum: WJT74_00395
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Entry
WJT74_00395 CDS
T11086
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
smat Sphingomicrobium maritimum
Pathway
smat03410
Base excision repair
smat03430
Mismatch repair
smat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WJT74_00395 (recJ)
03430 Mismatch repair
WJT74_00395 (recJ)
03440 Homologous recombination
WJT74_00395 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smat03400
]
WJT74_00395 (recJ)
DNA repair and recombination proteins [BR:
smat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
WJT74_00395 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
WJT74_00395 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
WJT74_00395 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
XAM21723
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Position
complement(80620..82365)
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AA seq
581 aa
AA seq
DB search
MTLDIRSSLSGQPWQWRYKGGDDLTRDLTDQLLLARGVEENDLPRQRAPRLRDFLPDPSV
FQDMDKAAVRIADALEAGERIALFGDYDVDGATSAALLARLLRQLGSDPLLYIPDRLMEG
YGPSGAALRGLKDQGADLCVTVDCGAQAFEALDEAADAGLDVIVCDHHQCDTRLPQAFAI
INPNRLDESEEGAAHGHLAAVGMAFLLGVALLRELRRRGKFVNGTPEPDLLPLLDLVALG
TVADVARLRTLNRAFVTQGLKIMARQQNIGLTALARVAGLKKAVVSRDLGFALGPRINAG
GRVGEADLGVRLLTTDDPDEAAQIAERLDRYNEERRAIEAAVTEAAMEAAEAQADRAVIC
VSGAGWHPGVVGIVASRLKERYGRPAFVIGEDEDGVGKGSGRSISGVDLGSAILAAKAEG
LVVAGGGHAMAAGVTVLQPAITKLAHYLSDRLEKDVEAARAGRALVIDAMLTPGGVAGSL
CDRIEQAGPFGAGWPAPRIAVGPARLLRPGVVGNGHVRFVALGDDQRSFKAIAFRAADTD
MGQALLAARPDQRFWLAGVMKRDDWTGGDAAELHVEDAAPA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcgatatccggtccagcctgtcgggacagccatggcaatggcgctacaagggc
ggtgacgacctcacccgcgacctcacggaccagctgttgctggcgcgcggggtggaggaa
aacgaccttccccgccagcgtgctccgcggctgcgcgatttcctccccgacccttccgtt
ttccaggatatggacaaggcggcggtgcgcatcgccgacgcgctcgaggcgggcgagcgg
atcgcgctgttcggcgactacgacgtcgacggcgcgacctccgccgcgcttcttgcccga
ctgctgcgccagctcggcagcgacccgcttctctacattcccgatcgcctcatggaaggc
tacgggccctccggcgcggcgctgcgaggcctcaaggatcagggcgccgacctgtgcgtc
acggtcgattgcggcgcgcaggcgttcgaggcactggacgaggccgccgatgcgggtctc
gacgtcatcgtctgcgaccatcaccagtgcgacacccggctgccgcaggcgttcgcgatc
atcaatcccaatcgcctcgatgaaagcgaggaaggcgccgcccacggtcatctcgccgcc
gtcggcatggcctttcttctcggcgtcgcgctgctccgcgaactgcgccgccgcggaaaa
ttcgtgaacggcacgcccgaacccgatctgctgccgctgctcgatctcgtcgcgctcggc
acggtcgccgacgtcgcacggttgcgtacgctcaaccgcgccttcgtgacgcagggcctg
aagatcatggcgcgtcagcagaacatcggtctgaccgcacttgcacgtgtcgcgggtctc
aagaaggcagtcgtgtcgcgcgatctcggcttcgcgctcggcccgcgcatcaacgcgggc
ggtcgggtcggagaggccgatctcggcgtgcgcctgctgaccaccgacgaccctgacgaa
gccgcccagatcgccgagcgtctcgaccgctacaacgaggaacgccgcgcgatcgaggct
gccgtgaccgaagccgcgatggaggctgccgaggcgcaggccgaccgtgccgtcatctgc
gtatcgggtgcgggctggcatcccggcgtggtcggcatcgtcgccagccgcctcaaggaa
cgctacggccgccccgccttcgtgatcggcgaggacgaagacggtgtaggaaagggatcg
ggacggtccatctccggcgtcgatctcggctccgcgattctcgccgccaaggccgaaggg
ctcgtcgtagccgggggcgggcacgcgatggccgcgggggtcactgtcttacagccggcc
attaccaaactggcgcactatctgtccgaccgcctcgagaaggacgtcgaggccgcccgc
gccggacgtgcgctggtgatcgacgccatgctgacccccggcggggtcgcgggcagcctg
tgcgaccggatcgaacaggcgggccccttcggcgcgggttggccggcgccgcgcatcgct
gtcggccccgcgcgcctgctgcggcccggcgtcgtcggcaatgggcatgtccgcttcgtg
gcactgggcgatgaccagcgcagcttcaaggcgatcgcctttcgtgccgccgataccgac
atgggccaggcgctgctcgccgcacggcccgaccagcgcttctggctcgcaggtgtgatg
aagcgcgacgactggaccggcggcgatgcggcggagcttcacgtcgaggatgcggccccc
gcctga
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