Sphingomicrobium maritimum: WJT74_03320
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Entry
WJT74_03320 CDS
T11086
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
smat Sphingomicrobium maritimum
Pathway
smat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WJT74_03320 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smat03400
]
WJT74_03320 (mutM)
Enzymes [BR:
smat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
WJT74_03320 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
WJT74_03320 (mutM)
DNA repair and recombination proteins [BR:
smat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WJT74_03320 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
NFACT_N
DUF7351
Motif
Other DBs
NCBI-ProteinID:
XAM22268
LinkDB
All DBs
Position
650797..651609
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AA seq
270 aa
AA seq
DB search
MPELPEVETTVRGLRPILEGATITRVVLRRADLRRPFPEGLGQALTSARVTELARRAKYG
LVRTDRGDTMIFHLGMSGRWRIDPETLETHDHLVLETGEGRRVALNDPRRFGSIDLVRSD
AEASFAGFAGMGPEPLPVVDAEELRARLAGKKVAIKLALLDQRVIAGLGNIYVCEALFRA
GIAPGRKAGSVSRMRLERLAQAIPAVLDEAIAAGGSTLRDYAQPDGDLGYFSKKFDVYGR
EGKECHRCGAAIRRRVQGGRSTFYCARCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagcttcccgaagtcgaaaccaccgtacgtgggctgcgcccgatcttggaagga
gccacgatcacgcgcgtcgttctgcggcgcgcggacttgcggcggccttttccggagggg
cttggacaggcgctgacgagtgcgcgcgtcaccgaactggcgcgacgggcgaaatacggg
ctggtgcgcaccgaccgaggcgacacgatgatcttccatctggggatgtcgggccgctgg
cggatcgatcccgagacgttggaaacgcacgatcatctcgtgctggaaaccggggaaggg
cgccgcgtcgcgctcaacgatccgcggcggttcggttcgatcgacctggtgcgtagcgac
gccgaggcgtcgttcgcgggctttgccgggatggggcccgaacccttgccggtcgtcgat
gcggaagaattgcgggcgcgccttgcggggaagaaagtggcgatcaagctggcactgctc
gaccagcgggtgatcgcgggactgggcaatatctacgtgtgcgaggcgctgttccgcgcg
gggatcgcgcccggacgcaaggcaggtagcgtgagcagaatgcggctcgaaagattggcg
caggcgatccccgcggtgttggacgaagcgatcgcggcaggtggatcgacgctgcgcgac
tatgcccagcccgatggcgacttgggctatttctccaagaagttcgacgtgtatgggcgc
gaggggaaagagtgtcatcggtgcggggctgcgatccgacgccgggtccagggcgggcgg
tcgaccttctattgcgcccggtgccagcgatga
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