Sphingomicrobium maritimum: WJT74_04595
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Entry
WJT74_04595 CDS
T11086
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
smat Sphingomicrobium maritimum
Pathway
smat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WJT74_04595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smat03400
]
WJT74_04595
Enzymes [BR:
smat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
WJT74_04595
DNA repair and recombination proteins [BR:
smat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WJT74_04595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XAM22504
LinkDB
All DBs
Position
complement(907380..908162)
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AA seq
260 aa
AA seq
DB search
MQCQRIDRAVNIANRAGRMGEGTRIDPREAAALLDWWRQAGVDAAVQSPAPTWRSLGKSP
VPVAVEAPAAAPVPASDTRPEPPARNASPSPDLPDDAKSIASWLKTRSERLGAQHVGAAL
SPDTGLAVIAARPVEAETGIGAAHAPLLAAMLRAIGQEGAPVVFLDPAFREGQSEREPVE
PDLVDAMKRLIATHRPGRLLFFGDGAARAMLGEPLAKARGKSHRIEGVPAVATFHPRWLM
DRPQDKRLAWEDLQILMENE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtgccaacgaattgaccgcgccgtcaacatcgccaatcgtgcggggcgaatgggc
gagggaacgagaatcgatccgcgagaggcggcggcgctactggactggtggcgccaggca
ggggtggatgcggcggtccagtcgcccgctcctacgtggcgttcgctggggaaatcgccg
gtcccggtggcggtggaagctcccgccgcggccccggttccggcatcggacacacggcca
gagccgccggcgcgcaacgcttcgccgtcgcccgacctccccgatgatgcaaagtccatc
gccagttggctcaagacgcgctctgaacggctcggtgcccagcatgtcggcgcggcgctg
tcccccgacaccgggctggcagtcattgccgcccgcccggtggaagcagaaacggggatc
ggcgcggcccatgcgccattgctcgcggcgatgctgcgcgcgatcggccaagagggtgca
cccgtcgtcttcctcgatcccgctttccgggaaggacagtccgagcgcgaaccggtcgag
ccggacctagtcgacgccatgaagcgcctgatcgccacgcaccgacccggccgtctcctt
ttcttcggcgatggcgcggcgcgcgcaatgctcggcgaaccgcttgccaaggcgcgcggc
aagtcacatcgcatcgagggggtcccggcggtagcgacctttcacccccgctggctgatg
gatcgaccacaggacaaacggctcgcgtgggaagacctgcagatcttgatggagaacgaa
tga
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