Sphingomicrobium maritimum: WJT74_04680
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Entry
WJT74_04680 CDS
T11086
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
smat Sphingomicrobium maritimum
Pathway
smat03030
DNA replication
smat03430
Mismatch repair
smat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WJT74_04680
03430 Mismatch repair
WJT74_04680
03440 Homologous recombination
WJT74_04680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smat03032
]
WJT74_04680
03400 DNA repair and recombination proteins [BR:
smat03400
]
WJT74_04680
Enzymes [BR:
smat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WJT74_04680
DNA replication proteins [BR:
smat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WJT74_04680
DNA repair and recombination proteins [BR:
smat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WJT74_04680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_5
AAA_22
RuvB_N
AAA_16
AAA_30
AAA_14
AAA_19
AAA_24
TIP49
AAA_assoc_2
TraI_hel_assoc_N
DUF815
B12-binding_2
Glyco_tranf_2_5
AAA_2
PIF1
AAA_18
Motif
Other DBs
NCBI-ProteinID:
XAM22520
LinkDB
All DBs
Position
922906..924651
Genome browser
AA seq
581 aa
AA seq
DB search
MTDDSPDIPTEIDAGPGLGLDEPEQPQASENAAYQVLARKYRPTTFDELIGQDAMVRTLA
NAIESDRIAHAFLMTGVRGVGKTSTARLMAKALNCIGPDGNGGPTIHPCGVCEPCQAIAE
GRHIDVIEMDAASHTGVDDMREIIEAVRYSSVSARYKIYIIDEVHMLSKSAFNALLKTLE
EPPPHVKFLFATTEVDKVPVTVLSRTQRFDLRRISADQLADHFAGIAEKEGIAVEPDALA
IIARAAEGSVRDGLSLLDQAIAHGGKEVSAAEVRDMLGLADRGRVRRLLDLLMDGDDAGL
LAGLDEAHELGLEPASLMRGLLDSLHAISRRKASGKDDVLRSTEERAAIAADAEAMGWPQ
LHSLWQLLLKGLKDVEVAPDPREAADMALLRAVHAAGMPDPGAVIDALNGGRAPPAPANA
SPDLAPAPTRAPPAAASTIAEPQKSPAEAPPRATADRSHAGLPPTFADFHALIDRDTANA
LLAVELHDKVGVVAYDPPCLTLQPKAPLDGDFARSLAKAAEGMTGRAWTVSLERQGGGPS
LAEQAVMAKQADRDAVMQSPMVKAVTDAFPDAELTDIKDAS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgattcgcccgacattcccaccgagatcgacgccgggccaggcctcggcctc
gacgaacccgaacagccgcaggcgtccgagaatgccgcctatcaggtactcgcgcgcaag
tatcgaccgacgaccttcgacgaactgatcggccaggatgcgatggtacgcacgctggcc
aacgcgatcgaaagtgaccgcatcgcgcacgcctttctgatgacgggggtgaggggggtc
ggaaagacctcgaccgcgcggctcatggcgaaggccctcaattgcatcggtcccgacggc
aatggcggcccgacgatccacccgtgcggcgtctgcgagccgtgccaggcgatcgccgag
ggtcgccacatcgacgtgatcgagatggacgctgccagccacaccggcgtcgacgacatg
cgcgagatcatcgaggcggtgcgttattcctcggtctcggcgcgatacaagatctacatc
atcgacgaagtccacatgctgtcgaaaagcgcgttcaacgccctgctgaaaactctcgag
gaaccgcccccccacgtcaaattcctgttcgccacgaccgaggtcgacaaggtccccgtg
accgtcctttcccgtacccagcggttcgacctccggcgcatctccgccgatcagctcgcc
gaccatttcgcggggatcgccgagaaagagggcatcgccgtcgagcccgacgcactcgcc
atcatcgcgcgcgctgccgaaggatctgtacgtgacggcctgtcgctgctcgaccaggcg
atcgcacacggcggcaaggaggtcagcgccgccgaagtccgcgacatgctcggccttgcc
gatcgcggccgggtacggcggctgctcgatcttctgatggacggcgacgatgcgggcctg
ctcgcgggcctcgacgaggcgcacgaactgggcctcgagcctgcctccctgatgcgcggc
ctgctcgacagcctccatgcgatcagccgccgcaaggccagcggcaaggatgacgtcctc
cgctcgacggaagaacgcgccgccatcgccgcggacgccgaagcgatgggctggccccag
ctgcattcgctttggcaattgctcctgaaagggctgaaggacgttgaggtcgctcccgac
ccgcgcgaagccgccgatatggccttgcttcgcgccgttcatgcagcggggatgcccgat
cccggtgcggtcatcgatgcgcttaatgggggcagggcgccccctgcgcccgccaatgcc
agtccagatctcgcaccggccccgactcgggcgccgcccgcagccgcatcaacgatcgcc
gaaccgcagaagagtccggccgaagcgccgccccgcgcgaccgccgaccgttcgcacgcg
ggactgccgcccaccttcgccgattttcatgccctcatcgaccgcgatacggccaacgcg
ctgctcgccgtcgaactgcatgacaaggtgggagtcgtcgcatacgatccgccctgcctg
acgcttcagccgaaagctccgctcgacggcgatttcgcgcgctcgttggcgaaggccgcc
gaaggaatgaccggccgagcgtggaccgtgtcgcttgaacggcaggggggcggccccagc
ctcgccgaacaagcggtcatggcgaaacaggccgaccgcgatgccgtcatgcaatccccg
atggtgaaggcggtaaccgacgccttccccgatgccgaactcaccgacataaaggacgca
agctaa
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