Sphingomicrobium maritimum: WJT74_07085
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Entry
WJT74_07085 CDS
T11086
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smat Sphingomicrobium maritimum
Pathway
smat03420
Nucleotide excision repair
smat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WJT74_07085
03430 Mismatch repair
WJT74_07085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smat03400
]
WJT74_07085
Enzymes [BR:
smat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WJT74_07085
DNA repair and recombination proteins [BR:
smat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WJT74_07085
MMR (mismatch excision repair)
Other MMR factors
WJT74_07085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DUF3553
DEAD
AAA_12
Motif
Other DBs
NCBI-ProteinID:
XAM20683
LinkDB
All DBs
Position
1399324..1401690
Genome browser
AA seq
788 aa
AA seq
DB search
MTESSPPDTAPPAYLARLNPAQREAAETLDGPVLILAGAGTGKTATLTARLAHLIATRRA
WPSQILAVTFTNKAAREMKERVADITNGAVDNMPWLGTFHSVCARMLRRHAELVGLQSNF
TIIDTDDQLRLLKQLVEAARIDPKRWPPRALAGLIDQWKNKGQTPSQLSAADAQAWGDGK
AGDLYREYQDRLKAVNAADFGDLLLHMLTIFKAHPDVLQEWRKRFKYLLVDEYQDTNASQ
YEWLRLLAAPDNNIACVGDDDQSIYSWRGADVSNILRFERDFPGAKIVRLEQNYRSTGHI
LAAASGVIAHNSGRLGKQLWTEAGKGEKVRVIGVWDGPEEARRVGEEIENQVSKGRGLND
VAILVRAQHQTREFEERFIAIGMDYQIIGGFRFYERAEIRDAIAYLRLIHQPQDDLAFDR
IVNTPKRGLGDKAVATIHQYARSQGLPLLLAAAQILDTDELTARARGSLGRFVGDIARWR
TLAAGTSAAPSENGERQVMESGTRALTPSELMQQAMEESGYVAMLQADKSAEAQGRLENL
AELARAMEEYDSLESFLEHVSLVMDTDRDKDGERVTLMTIHAAKGLEFPIVFCAGWEEGL
FPSQRALDEGGQASLEEERRLAYVAITRARERATVLHAANRRIYGQWTSSIPSRFVEELP
DDHTEQEQTMSGGASLWKAQFSANDDPFAHVARPASRGPGFKRAMSSGDDGRLSREEMIA
RSRGPVDVKASAVSLGNKGRDDLSTGMRVFHGKFGYGTIEAIEGNKLEIEFEKAGRKRVL
DSFVNLDA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaatcctctccgcccgacaccgccccgcccgcctatctcgcgcgcctcaacccc
gcgcagcgcgaggcggccgaaacgctcgacggccccgtcctcattctcgcgggcgcgggc
acgggaaagaccgcgaccctcaccgctcgcctcgcgcatctcatcgccacccgccgcgcc
tggccgagccagatcctcgcggtcaccttcaccaacaaggccgcgcgcgagatgaaggag
cgggtcgccgacatcaccaacggtgcggtcgacaacatgccttggctcggcaccttccac
agcgtctgcgcccgaatgctccggcgccatgccgagctggttgggctgcaaagcaacttt
acgatcatcgacaccgacgaccagctgcggctgctgaaacaactcgtcgaggccgcgcgg
atcgatcccaagcgctggcccccgcgcgcgctcgcgggcctgatcgaccagtggaagaac
aagggccagactccatcgcaactctccgccgccgacgcgcaggcctggggcgatggcaag
gccggcgatctctaccgggaatatcaggaccggctgaaagccgtgaacgccgccgatttc
ggcgacctgctgctccacatgctcaccatcttcaaggcgcatcccgacgtgctgcaagaa
tggcggaagcggttcaaatatctgctcgtcgacgaatatcaggacaccaacgccagccag
tacgaatggctgaggctcctcgccgcgcccgataataacatcgcctgcgtcggcgacgac
gatcagtcgatctattcgtggcgcggcgccgacgtttcgaacatcctgcgcttcgaacgc
gattttcccggcgcgaagatcgttcgactggaacagaattaccggtcgaccggccacatt
ctcgccgccgccagcggcgtcatcgcgcacaatagcggtcgtctcggcaagcagctctgg
accgaggctggcaagggcgagaaggtgcgcgtcatcggggtctgggacgggcccgaggag
gctcgccgtgtcggcgaagaaatcgagaaccaggtctcaaaggggcgaggtctgaacgac
gtcgccatcctcgtgcgcgcacagcaccagacccgcgagttcgaagaacgcttcatcgcc
atcggcatggactaccagatcatcggcgggttccgcttctacgaacgtgccgagattcgc
gacgccatcgcctacctgcgcctcatccaccagccgcaggacgacctcgccttcgaccgg
atcgtcaacacgcccaagcgcgggctgggcgacaaggcggtcgccaccatccatcaatat
gcgcgcagccagggtctgcccctgctgctcgccgccgcgcagatcctcgacacggacgaa
ctcaccgcccgtgcccgcggatcgctgggtcgcttcgtcggcgacattgctcgctggcgc
acgctggccgccggcacgtccgccgcacccagcgagaacggcgaacgacaggtcatggag
agcggtacgcgcgccctcaccccgtccgagctgatgcagcaggccatggaggaatcgggc
tatgtcgcgatgctccaggccgacaagtccgccgaggcgcagggccggctagagaacctc
gccgaactcgcccgcgcgatggaggaatatgacagcctcgagagcttcctcgaacatgtc
agcctcgtcatggacaccgaccgcgacaaggacggcgagcgggtgacgctgatgaccatc
cacgccgccaaggggctcgagtttccgatcgtcttctgcgcaggctgggaagagggtctg
ttcccctcgcaacgtgcgctggacgaaggggggcaggcgagcctcgaggaggaacgccgc
cttgcctatgtcgccatcacccgcgcacgcgagcgggcgaccgtgctgcacgccgccaac
cgacgcatctacggccagtggaccagctccattccctcccgcttcgtcgaggaactgccg
gacgaccacaccgaacaggaacagaccatgtcgggcggggccagtctttggaaggctcag
ttcagcgccaacgacgatcctttcgcccatgtcgctcgccccgcctcccgcggtccgggg
ttcaagcgggcgatgtcatcgggcgacgacgggcgcctgtcgcgcgaggaaatgatcgcg
cgcagtcgcggccctgtcgacgtgaaggccagcgccgtcagcctcggaaacaagggtcgc
gacgatctttccaccggcatgcgcgtctttcacggcaaattcggctatggcacgatcgag
gcgatcgaaggcaacaagctggaaatcgaattcgagaaggcgggtcgcaagcgggtgctg
gacagcttcgtcaacctcgacgcttga
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integrated database retrieval system
