Sphingomicrobium maritimum: WJT74_08695
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Entry
WJT74_08695 CDS
T11086
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smat Sphingomicrobium maritimum
Pathway
smat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WJT74_08695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smat03021
]
WJT74_08695
03400 DNA repair and recombination proteins [BR:
smat03400
]
WJT74_08695
Enzymes [BR:
smat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WJT74_08695
Transcription machinery [BR:
smat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WJT74_08695
DNA repair and recombination proteins [BR:
smat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WJT74_08695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XAM20993
LinkDB
All DBs
Position
complement(1700686..1701741)
Genome browser
AA seq
351 aa
AA seq
DB search
MSINAKNWQELKKPQGLDRKPGTDAKRKATFVAEPLERGFGMTLGNSLRRVLLSSLQGAA
ITSIKIEGVLHEFSSLAGVREDVTDIVINTKQIAVKMEGEGPKRLQLSATGPGEVTAAQI
AVSGDIEITNPDLVICHLDDGATLNMELTADIGSGYVPAAMNRPADAPIGLIPIDSLYSP
IRQVAYKVENTRVGQELDYDKLSLTVETDGTVTPEDAVAYAARILQDQLQLFVHFDDSAI
APAPAQSQAGTTEGGQDTNQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAE
MLRTPNFGRKSLNEIKEVLASMGLRLGMEIPGWPPENIEEMAKKLEQELLG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaacgcgaaaaactggcaggaactgaaaaagccgcagggcctcgaccgcaag
cccggcaccgacgccaagcgcaaggccaccttcgtcgccgagccgctcgaacgcggtttc
ggcatgacgctcggcaacagcttgcgccgcgtgctcctgtcctcgcttcagggcgcggcg
atcacctcgatcaagatcgaaggcgtgctgcacgaattctcctcgctcgcgggcgttcgc
gaggacgtgaccgacatcgtcatcaacaccaagcagatcgcggtgaagatggaaggcgaa
ggccccaagcgtctccagctttcggctaccggccccggcgaagtcaccgctgcccagatc
gcggtgtcgggcgatatcgagatcaccaaccccgatctcgtcatctgccacctcgacgat
ggcgccacgctcaacatggagctgaccgccgacatcggttcgggctacgtcccggcggcg
atgaaccgcccggccgacgcgccgatcggtttgatcccgatcgacagcctgtacagcccc
atccgccaagtcgcctacaaggtggagaacacccgcgtcgggcaggaactggactatgac
aagctgagcctgaccgtcgagaccgacggcacggtcacgcccgaggatgccgtcgcctat
gccgcgcgcatccttcaggaccagctgcagctgttcgtccacttcgacgacagcgcgatc
gcgcccgcgccggctcagagccaagcgggcacgaccgaaggcgggcaggacaccaaccag
ctcaatcgttaccttctcaagaaggtcgacgagctggaactgtcggtccgttcggcgaac
tgcctcaagaacgacaacatcatctacatcggcgatctggtccagaagaccgaagccgaa
atgctgcgcacccccaacttcggtcgcaagtccttgaacgagatcaaggaagtgctggcg
tcgatgggtctgcgccttggcatggaaatccccggctggccgcccgagaacatcgaggaa
atggccaagaagctggaacaggaactgctgggctaa
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